Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq38 174 2e-39 seq26 174 2e-39 >seq38 Length=221527 Score = 174 bits (192), Expect = 2e-39 Identities = 190/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || |||||||||||||| ||||| Sbjct 206468 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATCACCAAGCCCGCTAT 206526 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 206527 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 206586 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 206587 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 206646 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 206647 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 206706 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 206707 CCGTAAGTTT 206716 >seq26 Length=334019 Score = 174 bits (192), Expect = 2e-39 Identities = 201/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| || | Sbjct 295677 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCCA 295619 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || || ||||| || ||||||||| |||| | || |||| || |||| Sbjct 295618 TCCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 295559 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| |||| | || |||| |||| ||||||| || ||| |||| Sbjct 295558 CCCGCGGCGTGCTCAAGTCCTTCTTGGAGTCCGTCATCCGTGATGCTGTCACCTACACCG 295499 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| ||||||||||| || || | || | |||||||| | || || |||| Sbjct 295498 AGCACGCTAAGCGTAAGACTGTTACTTCGCTTGACGTTGTCTATGCTCTTAAGCGCCAAG 295439 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| |||| || || || |||| Sbjct 295438 GCCGTACTCTTTACGGATTCGGTGGTTA 295411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074808676604