Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq198 201 1e-46 seq67 111 2e-19 >seq198 Length=8267 Score = 201 bits (222), Expect = 1e-46 Identities = 743/1150 (65%), Gaps = 18/1150 (2%) Strand=Plus/Minus Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950 ||| | ||| ||||| || ||||| || ||||||| || | || | || ||||| Sbjct 5352 GGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCGATAATCTC 5293 Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010 |||||| || ||| | ||||| || | || | || |||||||| ||||| || Sbjct 5292 AGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCA 5233 Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | Sbjct 5232 AGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTA 5173 Query 63071 CCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGT 63125 ||||| | || ||||||| || | || | | ||| | ||||| | | Sbjct 5172 CCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGC 5116 Query 63126 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 63185 ||| | | | |||||||| || || | |||| | | ||||| |||| || Sbjct 5115 GTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGG 5058 Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245 || | | || ||| || |||| ||| || || ||||| |||||||| || |||| Sbjct 5057 CAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCAC 4998 Query 63246 AGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304 ||||| || ||| || || | | | | ||||| || || |||||| ||||| Sbjct 4997 AGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATC 4939 Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 ||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || || Sbjct 4938 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCG 4879 Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424 ||||| || ||||| || | || | |||||||| ||| | || | || ||| |||| Sbjct 4878 CTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAAC 4819 Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTA 63482 ||||||||| || || ||||| || | || || || | || ||||| | Sbjct 4818 AATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTG 4759 Query 63483 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63542 |||| ||||| || || || || | || ||||| | || || || | || Sbjct 4758 GACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 4701 Query 63543 TCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63602 ||||| |||||||| ||||| || || ||| || || || || || | | ||| Sbjct 4700 TCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGG 4641 Query 63603 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63662 | | ||| | ||||| || | || || || ||||| || || | |||| || Sbjct 4640 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGAC 4581 Query 63663 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACA 63722 | | | ||| |||||||| || || || ||| |||||||| || || ||| Sbjct 4580 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACA 4521 Query 63723 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGAT 63782 ||||| | || ||||||||| | ||| | | ||| ||| || | | ||| || Sbjct 4520 CGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGAC 4461 Query 63783 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63842 || | || ||||| || || |||||||| ||||| || ||||| | |||| || Sbjct 4460 CGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCC 4401 Query 63843 GAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGAT-ACTTGAAATAATCGG 63901 |||||||| | || || || |||| || | | | ||| | | ||| || || || Sbjct 4400 GAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGG 4342 Query 63902 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 63961 || | || ||||| || || ||||| | | | | ||| || || || Sbjct 4341 AGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAA 4282 Query 63962 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATA 64021 | | |||||||||| |||||| || || || ||||| || | || || |||||||| || Sbjct 4281 TTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTA 4222 Query 64022 ATCCGGATGT 64031 || || ||| Sbjct 4221 GTCGGGGTGT 4212 >seq67 Length=141994 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| || || || ||| |||||||| || | || | |||||||| Sbjct 89920 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 89979 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||||||||||||||| || ||||| || ||||| |||||||| || Sbjct 89980 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 90039 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || ||||||| Sbjct 90040 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 90073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943867232480