Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq198 241 3e-58 >seq198 Length=8267 Score = 241 bits (266), Expect = 3e-58 Identities = 619/928 (67%), Gaps = 16/928 (2%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||||| |||||| | ||| || ||||| ||| || || || || ||| ||| Sbjct 4438 TTCGGATTTAAGACCCTCGAGCGGTCATACCTTCTTCGGATTAACGGCAATGTTGCTGAG 4497 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| || | |||||||||||| | || || || || ||| |||| Sbjct 4498 CGTCCTCAGCACTTGCTGATGCGTGTTGCTGTCGGAATTCACGGCGAGGACATTGAGAAG 4557 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| ||||| | ||| | || | ||| ||||| |||||| | || || Sbjct 4558 GCCATTGAGACATACCA-CTTG-ATGTCCCAAAAGTACTTCACTCACGCCTCCCCCACTC 4615 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| |||||| | |||| | || ||| | | |||||||| || | | ||| | Sbjct 4616 TGTTCAATGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCG 4675 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 || ||| |||||||| | ||| || || |||| ||||| | || ||||||| | Sbjct 4676 CAGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCG 4735 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| | ||||| |||| || || | ||||||| || Sbjct 4736 CTGGTGGTATCGGTCTCAATGTCCACCGCATTCGCGCTACCGGTTC-TTACATTGCTGGA 4794 Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807 || || | ||| || || | ||||| ||||| ||||||||| |||| || || | Sbjct 4795 ACCAACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGT 4854 Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867 || || ||||||||||| |||||| || || ||||| || || || ||||| Sbjct 4855 TATGTGGACCAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGG 4914 Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGCG 363926 || |||||| | || ||||| || || || || || || ||| || || ||||| | || Sbjct 4915 CACGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCAC-GGTAAGGAGGAGGTTCG 4973 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || ||||| || ||||| || || ||| | || | || ||||||||||| ||||| Sbjct 4974 CGCTCGTGACCTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGC 5033 Query 363987 ---AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 ||| | ||| | ||||| ||||| | || || || || | ||||| | Sbjct 5034 CAACGGT---GACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTA 5090 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 ||||| || | | ||||| |||| ||||| || |||||| | || ||||| Sbjct 5091 CGGTGATGAGTTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGAC 5150 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 || || |||||||| |||| ||||| | || | |||| |||||| || | || Sbjct 5151 CATCAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCC 5210 Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 || ||| | ||||| ||| | |||||| ||| |||||| || |||| ||||| || Sbjct 5211 CTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTAT 5270 Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || |||| | ||||| || || |||||||| || |||| || || || ||| || | Sbjct 5271 TC-GCAGCTCTAACCTGTGCACTGAGATTATCGAGTACAGTGCCCCTGATGAGGTGGCTG 5329 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCC 364310 | || ||||| || || |||| || || Sbjct 5330 TTTGCAACCTGGCTTCTCTCGCCCTCCC 5357 Score = 116 bits (128), Expect = 1e-20 Identities = 272/408 (67%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || |||||||| || || ||| || || || || ||| ||||||||||| || Sbjct 5803 GCCCCCATGCCTACTGCCAGTACCAGTCAAATTCTGGGCTTCAATGAGTGCTTCGAGCCT 5862 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || || | || || ||||| ||||| | || || || | | | || || Sbjct 5863 TACACCTCGAACATCTACTCCCGCCGTGTTCTGGCTGGTGAGTTCCAGATCGTCAACCCT 5922 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || | |||||||| ||||| ||| |||||| |||| |||||||||| |||| Sbjct 5923 TGGCTCCTGAAGGATCTGGTCGACCTCGGCCTGTGGTCCGACAACATGAAGAACCGTATC 5982 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 ||||||| | || || || |||||||| || | || | ||| | ||| | | Sbjct 5983 ATCGCCGATGGCGGCTCCGTCCAGAACATCCCTAACATCCCCGCCGATATCAAGGCCCTG 6042 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCG-AACTCTCATTGATATGGCGGCCGATCGCGG 365048 ||||| ||||| ||||| || ||| ||| ||| || | | ||||| ||||||||||| Sbjct 6043 TACAAGACCGTTTGGGAGATCTCCCAGCGCAACATTC-TACAGATGGCCGCCGATCGCGG 6101 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAA 365108 ||| || ||| |||| ||||| | ||| | | ||| |||| ||| | ||| Sbjct 6102 TGCCTTCATCGATCAGTCGCAGTCCCTCAACATCCACTTGAAGGAGCCCACCATGGGCAA 6161 Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||| || |||||| ||| ||| ||||| ||| | ||||| || Sbjct 6162 GCTGACCAGCATGCACTTCGCCGGCTGGAAGATGGGTTTGAAGACCGG 6209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346452734696