Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq67 132 5e-26 seq15 116 3e-21 seq12 107 2e-18 seq43 95.1 1e-14 >seq67 Length=141994 Score = 132 bits (146), Expect = 5e-26 Identities = 308/458 (67%), Gaps = 15/458 (3%) Strand=Plus/Minus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || ||||| |||| |||| ||||| || ||||||||| |||| || || ||| Sbjct 90092 ACCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCA 90033 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || ||| ||||||| | | || | ||| | ||||| || || || || |||| Sbjct 90032 TTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAAC 89973 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||| |||| || || || ||||| || || || |||||||| ||||| || | | | Sbjct 89972 GAGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGCTTGTCTG--CTGTT-CTCC 89916 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACC---GTGCT-GAGCATGTTCAAG--GAGGCG 46377 | | || || || || |||||| || ||| | ||| || | | ||||| Sbjct 89915 CACATGAACCACC-----GC-CCCGACCCCAAGGTGGTTGAGGATATCATTGTCGAGGCT 89862 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 || | || ||| ||||||| | || | ||| || ||| | |||||| ||||||||| Sbjct 89861 GTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAAC 89802 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 || || |||||||| ||||| ||||| || || ||||| ||||| ||| || | Sbjct 89801 GCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGC 89742 Query 46498 CAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| | | |||| ||| || || || || ||| | ||||||| ||| Sbjct 89741 AACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCC 89682 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || ||||||||||| ||||| || || Sbjct 89681 GGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTA 89644 >seq15 Length=439316 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| ||||||||||| ||| ||| Sbjct 139621 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 139680 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||| ||||| || || || || || ||||| ||| || ||||| | | Sbjct 139681 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 139740 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| |||| ||||| ||| ||||| || || || || |||| Sbjct 139741 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 139800 Query 131225 AA 131226 || Sbjct 139801 AA 139802 >seq12 Length=470192 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || |||| || ||||| || || ||||| || || | Sbjct 271200 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 271259 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| || |||| |||||||||||||| || || Sbjct 271260 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 271319 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | |||||| | ||||| | Sbjct 271320 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACC 271379 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||||| ||| || ||||| || || || |||| Sbjct 271380 TCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 271416 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | || |||||||| || ||||| || ||| || ||||| | Sbjct 271498 CGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCG 271557 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || || |||| ||||||||||||||||| || || || || ||| Sbjct 271558 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 271617 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | |||||| ||||||| | || | ||| | | Sbjct 271618 TCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATG 271677 Query 131200 GTTTTACCGGT 131210 || || || || Sbjct 271678 GTCTTGCCAGT 271688 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || ||||| || |||||||||||| Sbjct 270972 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 271031 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| | ||| |||||||| || || Sbjct 271032 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 271091 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||| | | || | |||||||| ||||||| Sbjct 271092 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 271151 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || |||||||||||||| Sbjct 271152 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 271198 >seq43 Length=200701 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | |||||||||||| || ||||||||||| Sbjct 25518 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAA 25459 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| ||||| || ||||| || || Sbjct 25458 AGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGA 25399 Query 131128 ATTCCTTCTTTGTC-GGTG 131145 || || || ||||| |||| Sbjct 25398 ATACCCTCCTTGTCTGGTG 25380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010274731520