Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq198 190 3e-43 seq67 107 2e-18 >seq198 Length=8267 Score = 190 bits (210), Expect = 3e-43 Identities = 737/1144 (64%), Gaps = 18/1144 (2%) Strand=Plus/Minus Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811 ||| ||||| || ||||| || ||||||| || | || | || ||||||||||| Sbjct 5346 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCGATAATCTCAGTGCA 5287 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 || ||| | || || || | || | || |||||||| ||||| || ||||| Sbjct 5286 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 5227 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931 ||| || || ||||| || ||||||| ||| |||| | || | ||| || | ||||| Sbjct 5226 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGA- 5168 Query 62932 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATAC 62986 | || ||||||| || | || | | ||| | ||||| | | ||| | Sbjct 5167 GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAG 5110 Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046 | | |||||||| || || | |||| | || ||||| |||| || || | Sbjct 5109 AGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 5052 Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63105 | || ||| || |||| ||| || || ||||| |||||||| || |||| ||||| Sbjct 5051 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 4992 Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165 || ||| || || | | | | ||||| || || |||||| ||||||||||| Sbjct 4991 TAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAA 4933 Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225 | | | | ||| | |||||||| |||| ||| ||||| | | || || || ||||| Sbjct 4932 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTT 4873 Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 4872 ACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 4813 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63343 ||||| | || ||||| || | || || || | || ||||| | ||| Sbjct 4812 GTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 4753 Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 63403 | ||||| || || || || | || ||||| | || || || | |||||||| Sbjct 4752 G--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 4695 Query 63404 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63463 || ||||| || || || | ||| || || || || || | | ||| | | Sbjct 4694 ATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGG 4635 Query 63464 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523 ||| | ||||| || | || || || |||||||| || | |||| || | | Sbjct 4634 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAG 4575 Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63583 | ||| |||||||| || || || ||| |||||||| || || |||||||| Sbjct 4574 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATC 4515 Query 63584 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63643 | || ||||||||| | ||| | | ||| ||| || | | ||| || || Sbjct 4514 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCG 4455 Query 63644 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703 | || ||||| || || |||||||| ||||| || ||||| | |||| |||||||| Sbjct 4454 AGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTG 4395 Query 63704 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATAGGAAAATG 63762 || | || || || |||| | | | | || | | ||| || |||||| | Sbjct 4394 AGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGG 4336 Query 63763 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822 || ||||| || |||||||| | | | | ||| || || ||| | || Sbjct 4335 CTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTT 4276 Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882 |||||||| ||||| || || || ||||| || | || || |||||||| || || || Sbjct 4275 TTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 4216 Query 63883 ATGT 63886 ||| Sbjct 4215 GTGT 4212 >seq67 Length=141994 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || ||| || || || ||| |||||||| || | || || |||||||| Sbjct 89920 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 89979 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| || Sbjct 89980 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 90039 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || || || || || ||||||| Sbjct 90040 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 90073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628610068800