Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq67 123 5e-23 seq126 107 4e-18 >seq67 Length=141994 Score = 123 bits (136), Expect = 5e-23 Identities = 276/412 (67%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 ||||| ||||||||| || | |||||| ||| ||||| |||||||||||||||| Sbjct 89653 ACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAG 89712 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| || || ||||| | ||| | ||| || || || | | |||||| || || Sbjct 89713 GGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACG 89772 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCC 251733 ||||| | |||| | |||||| | | ||||||||||| || | || |||| || Sbjct 89773 AACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGGCCGCAGGGAAGAGCG 89832 Query 251734 TCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC----TG 251789 ||| || ||| |||| ||| | | || ||||| | | || ||| ||| || Sbjct 89833 TCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAACCACCTTG 89892 Query 251790 TGCCAGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAG 251849 | | | | | | ||| || | ||| |||| || |||| | ||| || Sbjct 89893 GGGTCGGGGC-GGTGGTT---CATGTGGGAGAACAGCAGACAAGCAAAGTCAGTGTGGAG 89948 Query 251850 ACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTT 251909 |||||| || || ||| ||||||||||| | | || |||||||| | ||||| || Sbjct 89949 ACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTT 90008 Query 251910 CCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 | | ||||||||||| | | || || || ||||| | | |||||| ||| Sbjct 90009 CTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACA 90060 >seq126 Length=47297 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| ||||| || |||| |||||| || || || |||| ||||||||||| || Sbjct 13804 AGGTGTCGATCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTTAA 13745 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | | ||||||||| | || || |||||| |||| ||||| || | Sbjct 13744 CCAGACTCACCTGCGCCTGAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 13685 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 13684 CGGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 13625 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 13624 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 13583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831163599948