Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq67 149 6e-31
seq15 102 8e-17
seq12 89.7 5e-13
>seq67
Length=141994
Score = 149 bits (164), Expect = 6e-31
Identities = 302/446 (68%), Gaps = 23/446 (5%)
Strand=Plus/Minus
Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461
|||| ||||||||| || ||||| | || || |||||| || ||| ||||||| |
Sbjct 90076 TGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 90017
Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521
| || | | ||| ||||||| || || || ||| |||||||||||| || || |
Sbjct 90016 GGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTG 89957
Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575
| || || || ||||| |||||||| || || || | ||| || | | |||
Sbjct 89956 ATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 89897
Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632
| || ||| | ||| | || ||| ||||| || | |||||
Sbjct 89896 ACCCCAAGGTGGTTGAGGATATCAT--------TGTC----GAGGCTGTCGGAATCGAGC 89849
Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692
||||||| | || | ||| || || || ||||| ||||||||||| || ||||
Sbjct 89848 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 89789
Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751
|||||||||| ||||| || || || || ||| ||||| ||||| || | | ||||||
Sbjct 89788 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGTAC 89730
Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811
| ||||||| ||| || || || || ||| | ||| || | | ||||||||||||
Sbjct 89729 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAAC 89670
Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| ||||| ||||| ||||| || ||
Sbjct 89669 TTCTTCGAAAAGCGTGTCGGTGACTA 89644
>seq15
Length=439316
Score = 102 bits (112), Expect = 8e-17
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 139621 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 139680
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| |||||||||||||| || || || || || ||||| || | || || || | |||
Sbjct 139681 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 139739
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 139740 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 139798
Query 138603 AAAA 138606
|||
Sbjct 139799 GAAA 139802
>seq12
Length=470192
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| |||||| || | || | | |||||| || |||||||||||
Sbjct 270743 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 270802
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| |||||| ||||| || || ||||| | |||| |||||||| ||||| |||||
Sbjct 270803 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 270862
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| | || | || | ||| || | |||||| | ||||
Sbjct 270863 AATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCTGAGCTCTCC 270920
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | || || || |||| ||| || ||||| || |||||
Sbjct 270921 ACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259744996160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |