Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq67 149 6e-31 seq15 102 8e-17 seq12 89.7 5e-13 >seq67 Length=141994 Score = 149 bits (164), Expect = 6e-31 Identities = 302/446 (68%), Gaps = 23/446 (5%) Strand=Plus/Minus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| || ||||| | || || |||||| || ||| ||||||| | Sbjct 90076 TGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 90017 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 | || | | ||| ||||||| || || || ||| |||||||||||| || || | Sbjct 90016 GGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTG 89957 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 | || || || ||||| |||||||| || || || | ||| || | | ||| Sbjct 89956 ATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 89897 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||| | || ||| ||||| || | ||||| Sbjct 89896 ACCCCAAGGTGGTTGAGGATATCAT--------TGTC----GAGGCTGTCGGAATCGAGC 89849 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| | || | ||| || || || ||||| ||||||||||| || |||| Sbjct 89848 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 89789 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||||||||| ||||| || || || || ||| ||||| ||||| || | | |||||| Sbjct 89788 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGTAC 89730 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||||| ||| || || || || ||| | ||| || | | |||||||||||| Sbjct 89729 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAAC 89670 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||| ||||| ||||| || || Sbjct 89669 TTCTTCGAAAAGCGTGTCGGTGACTA 89644 >seq15 Length=439316 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 139621 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 139680 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||||||||| || || || || || ||||| || | || || || | ||| Sbjct 139681 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 139739 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 139740 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 139798 Query 138603 AAAA 138606 ||| Sbjct 139799 GAAA 139802 >seq12 Length=470192 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| |||||| || | || | | |||||| || ||||||||||| Sbjct 270743 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 270802 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||| || || ||||| | |||| |||||||| ||||| ||||| Sbjct 270803 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 270862 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | |||||| | |||| Sbjct 270863 AATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCTGAGCTCTCC 270920 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || || |||| ||| || ||||| || ||||| Sbjct 270921 ACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259744996160