Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq198 141 1e-28 seq67 123 4e-23 >seq198 Length=8267 Score = 141 bits (156), Expect = 1e-28 Identities = 478/727 (66%), Gaps = 22/727 (3%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || |||||||| |||| | ||| | | || | | ||| ||||||||||||||| Sbjct 6263 TCAACGGTGAACTGGATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 6204 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || | ||| ||| ||| ||| | ||||||| | ||| |||| || | |||| || Sbjct 6203 TTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTGGTCAGCTTGCCCATGGTGGGCTCC 6144 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 || ||| ||||| || ||||| || |||||| ||||| || ||||| |||||||| Sbjct 6143 TTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG-AAGGCACCGCGATCGGCGGCCAT 6085 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT-GTT 204080 | | |||| | ||| || |||||||| || |||||| ||| | | || | | | Sbjct 6084 CTGTAGAATGTTGCGCTGGGAGATCTCCCAAACGGTCTTGTACAGGGCCTTGATATCGGC 6025 Query 204081 GAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 | || || || | || || || |||||| ||||| || | | || || | Sbjct 6024 GGGG---ATGTTAGGGATGTTCTGGACGGAGCCGCCATCGGCGATGATACGGTTCTTCAT 5968 Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198 | || ||||| ||| | || ||| ||| || || ||||||| |||||| Sbjct 5967 GTTGTCGGACCACAGGCCGAGGTCGACCAGATCCTTCAGGAGCCAAGGGTTGACGATCTG 5908 Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258 || || || | ||| || | |||| | | | ||| |||| | || ||||| ||| Sbjct 5907 GAACTCACCAGCCAGAACACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTC 5848 Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 ||| ||| | ||| ||| ||| ||||| || |||||||| || | | ||| ||| Sbjct 5847 ATTGAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCATGGGGGCAACCAACAGACTGTT 5788 Query 204319 GCGCACACCGTATTTTTGG--ACCCTGCGCTTCAGAGAGGTCCAGTC---GTGCATCGCA 204373 ||| ||||| | | | || | | || |||||| |||| |||||| | | |||| Sbjct 5787 GCGGACACC--AGTCTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAG-ATCG-- 5733 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433 | || | | ||||||||||| |||| | |||||| || ||| || ||| | Sbjct 5732 GTAGGGGTGCGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGG 5673 Query 204434 TACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492 || ||| ||| || | | | |||| || | || | || || | || ||| | Sbjct 5672 TAAGTCTCATAGGGACCCAGCTTCTT-GGCAATCTCGGCGGAAGCAGTCAAGGCACCGTG 5614 Query 204493 GTACATGGTCTCAAAGATCTGAACGTTTAATCTGGC-GGCCTCCGTTCCGTCAAACGCCA 204551 ||| |||||||| |||||||| | ||| | | || | |||||| | ||| |||| || Sbjct 5613 GTAGATGGTCTCGAAGATCTGGATGTTGAGT-TGTCTGGCCTCGGGAGAGTCGAACGGCA 5555 Query 204552 GACCCAG 204558 ||| ||| Sbjct 5554 GACGCAG 5548 >seq67 Length=141994 Score = 123 bits (136), Expect = 4e-23 Identities = 285/426 (67%), Gaps = 9/426 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||| ||||| |||||||||||||| ||| ||| || || |||||||| |||| ||||| Sbjct 89658 CTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAGGGGTT 89717 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||| ||| |||||| | ||| || || || || Sbjct 89718 GGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTC 89777 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| |||||| ||| ||| || || ||||| | ||| || || || | Sbjct 89778 AATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGGCCGCAGGGAAGAGCGTCAGT 89837 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGC-GAGACACGTTCGTACC 159887 || ||||||| ||| || |||| || ||| | || | | | ||| || | | Sbjct 89838 GAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAACCACCTTGGGGTC 89897 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| | | | |||||| ||||| || || |||||||| ||| || || Sbjct 89898 GGGGCGGTGGTTC---ATGTGG---GAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACC 89951 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || || ||||| ||||||||||| | |||| || ||||| | |||||| || Sbjct 89952 CTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTT 90011 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||| || |||| || || | ||| || ||||| |||||||| || || || || Sbjct 90012 CAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACAGCGGCGAAGGC 90071 Query 160066 CACGAG 160071 || || Sbjct 90072 AACCAG 90077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150945919680