Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq12 136 4e-27
seq15 132 5e-26
seq43 84.2 2e-11
>seq12
Length=470192
Score = 136 bits (150), Expect = 4e-27
Identities = 176/239 (74%), Gaps = 8/239 (3%)
Strand=Plus/Plus
Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418
|||| | ||| || | | |||||||||||| |||| || |||||||| ||||| ||||
Sbjct 270736 ATTACTGGCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGT 270795
Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478
|||| || ||||| || | || || |||||||| || ||||| || | ||||||||||
Sbjct 270796 AGTCCGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGT 270855
Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534
| | || | | |||||||||| ||||| |||||| ||| | | | ||||| |
Sbjct 270856 CAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTGTCTGAG 270914
Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| || | ||||| || || || |||| || || ||||||||||||||
Sbjct 270915 CTC---TCCACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970
Score = 122 bits (134), Expect = 1e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | || |||||| ||||| || |||||||| || ||||| |||| |||
Sbjct 271504 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 271563
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| ||||| || ||||| ||||||||||| | || | || |||||||||| |
Sbjct 271564 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 271623
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | || ||||| || || || || | |||||||| |||
Sbjct 271624 ATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 271683
Query 46565 CCCGT 46569
|| ||
Sbjct 271684 CCAGT 271688
Score = 104 bits (114), Expect = 3e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || ||||| || ||||| || || || || |||| || |||||||||||||| ||
Sbjct 271235 CTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAA 271294
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||||||||| | || | || |||||||||| |||||| ||| | |||
Sbjct 271295 GATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTCA-CGT 271353
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | || ||||| || || || || | || ||||| || || ||||| || || |
Sbjct 271354 TGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGA 271413
Query 46581 C 46581
|
Sbjct 271414 C 271414
>seq15
Length=439316
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| |
Sbjct 139621 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 139680
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||| ||||| | || | || |||||||||| |||||| |||||| ||| |
Sbjct 139681 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 139739
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 139740 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 139799
Query 46583 AA 46584
||
Sbjct 139800 AA 139801
>seq43
Length=200701
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| |||| ||||||||||| || |||||
Sbjct 25483 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 25424
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
||||| || || ||||| | || | | |||||||||
Sbjct 25423 GATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTC 25385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235375974560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |