Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq198 185 1e-41 seq121 120 4e-22 seq67 109 7e-19 >seq198 Length=8267 Score = 185 bits (204), Expect = 1e-41 Identities = 384/564 (68%), Gaps = 17/564 (3%) Strand=Plus/Plus Query 111924 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGG 111983 |||||| |||| ||||| || || |||||| ||| || || ||||| |||| | ||| Sbjct 4813 GGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGTGGACCAGGGTGG- 4871 Query 111984 CGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATG 112037 | |||| || | | || |||| || ||||| |||||||| ||| || | Sbjct 4872 --TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTC 4929 Query 112038 GAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCGCGATCTCT 112095 |||||||| || |||| || || ||| | ||||||| |||| | || || || | Sbjct 4930 GAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCT--CGTGACCTTT 4987 Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155 ||| |||||| |||| || ||||||||||||||| | || |||| | || | ||| Sbjct 4988 TCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGA 5047 Query 112156 CTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAG 112215 | ||||| || || | |||| || || || | |||| | ||||| ||||| || | Sbjct 5048 CGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCGAGG 5107 Query 112216 CCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGAT 112274 | |||||| | ||||||||| | || | || ||| | ||| | | || | || Sbjct 5108 CTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGC-AAGACCAT-CAAGGCTCAGAA 5165 Query 112275 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333 | | ||| | || |||||| || | || || |||||||||| || | ||||| ||||| Sbjct 5166 GCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 5225 Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 || || || ||| | |||||||| || ||||| ||||| || || || ||||| Sbjct 5226 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCTCTAACCT 5285 Query 112394 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 112453 || || || || | || | | | | |||||| |||||| || ||||| || || Sbjct 5286 GTGCACTGAGATTATCGAGTACAGTGCCCCTGATGAGGTGGCTGTTTGCAACCTGGCTTC 5345 Query 112454 AATCGCTCTCCCCAAGTATGTGGA 112477 |||| ||||||| ||||| || Sbjct 5346 TCTCGCCCTCCCCACCTATGTCGA 5369 >seq121 Length=54253 Score = 120 bits (132), Expect = 4e-22 Identities = 285/424 (67%), Gaps = 25/424 (6%) Strand=Plus/Plus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || || || || | ||| || | ||||| | ||| ||||| || | Sbjct 12636 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 12695 Query 15945 GCGATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | |||||| | | || | | ||| |||||||||||||| || | || ||||| Sbjct 12696 GCCAAGACAACCA--CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 12753 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT---- 16056 | | ||| ||| |||||||| || | ||||||| | | | ||||| Sbjct 12754 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 12807 Query 16057 ---TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGA 16113 |||| | |||||||| ||||||||||||| |||||| || ||| | || ||| Sbjct 12808 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 12867 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | | |||||||| || ||||| || || ||||| |||||||| || ||||| | | Sbjct 12868 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 12927 Query 16174 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | | | ||| || | ||| || || |||||||| ||| |||| || || | Sbjct 12928 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 12985 Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--A 16289 |||||||| ||||| || ||| | ||| | |||||| || |||||||| || || | Sbjct 12986 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 13045 Query 16290 CTTC 16293 |||| Sbjct 13046 CTTC 13049 >seq67 Length=141994 Score = 109 bits (120), Expect = 7e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| ||| ||| || | || || || ||| ||||||||||||||||| || || | Sbjct 90091 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 90032 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | ||||| |||||||| || || ||||| |||||| |||||||||| Sbjct 90031 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 89972 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || | ||||| ||||| ||||| |||||| || ||||| Sbjct 89971 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 89932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739079028160