Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq198 212 7e-50 >seq198 Length=8267 Score = 212 bits (234), Expect = 7e-50 Identities = 542/815 (67%), Gaps = 25/815 (3%) Strand=Plus/Minus Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 |||||| ||||||| || | ||| || || ||||| |||| ||| || | | | Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 ||| || | ||| || || |||| ||| || || ||| ||||| ||||||||| || Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248 Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450 || |||||| |||||||| ||||||||| | ||| ||||||| || ||||| | Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188 Query 110451 CTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTT 110506 || ||||||||| | ||| | | || | | | | | || |||| || | | || | Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCG---GCCACGGCCCT 5132 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 ||| ||||||||||| ||| | |||| || || | ||||| ||||||| || || Sbjct 5131 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5072 Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGA 110623 |||| | ||| |||||||| | ||| | |||| | |||| || | |||||||| Sbjct 5071 GGGCCTCATTGGGGCAGAAGAGCGTCCAGT---CACCGTTGGCCTCGACGCGCTTCATGA 5015 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 | || || || |||||| || ||||||||||||| ||| |||| || | ||| | Sbjct 5014 AGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGT 4955 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 | || ||| || || | || || | || ||| | |||||| || || || |||| | Sbjct 4954 GATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGG 4895 Query 110744 CGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | || || ||| || || |||||| ||||| ||||| ||| || | Sbjct 4894 CAAAGGCACCGGGGCGCTTGTTACCAC---CCTGGTCCACATAACGTGCGGTGTTGTTAA 4838 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 | || | |||||||||| ||| || | ||| || || || || ||| || Sbjct 4837 ACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAAC 4778 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | || |||||| ||||| || | ||| |||||||| || ||| || | Sbjct 4777 CGGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGG 4718 Query 110918 CACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 |||| ||| |||| ||| |||||||||| ||||| ||||| | | ||| || Sbjct 4717 CACAGGTCT-TGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGG 4659 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 |||||||| | | ||| || | || || | |||||||| || || || | || ||| Sbjct 4658 AAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 4599 Query 111037 ATGAACAGACCTTGGGACATCTTGTTGTATGTGTC 111071 |||| |||||||||| || |||||| || Sbjct 4598 GTGAAGTACTTTTGGGACATCAAGTGGTATGTCTC 4564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972848978400