Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq198 212 7e-50
>seq198
Length=8267
Score = 212 bits (234), Expect = 7e-50
Identities = 542/815 (67%), Gaps = 25/815 (3%)
Strand=Plus/Minus
Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330
|||||| ||||||| || | ||| || || ||||| |||| ||| || | | |
Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308
Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390
||| || | ||| || || |||| ||| || || ||| ||||| ||||||||| ||
Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248
Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450
|| |||||| |||||||| ||||||||| | ||| ||||||| || ||||| |
Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188
Query 110451 CTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTT 110506
|| ||||||||| | ||| | | || | | | | | || |||| || | | || |
Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCG---GCCACGGCCCT 5132
Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566
||| ||||||||||| ||| | |||| || || | ||||| ||||||| || ||
Sbjct 5131 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5072
Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGA 110623
|||| | ||| |||||||| | ||| | |||| | |||| || | ||||||||
Sbjct 5071 GGGCCTCATTGGGGCAGAAGAGCGTCCAGT---CACCGTTGGCCTCGACGCGCTTCATGA 5015
Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683
| || || || |||||| || ||||||||||||| ||| |||| || | ||| |
Sbjct 5014 AGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGT 4955
Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743
| || ||| || || | || || | || ||| | |||||| || || || |||| |
Sbjct 4954 GATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGG 4895
Query 110744 CGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797
| | || || ||| || || |||||| ||||| ||||| ||| || |
Sbjct 4894 CAAAGGCACCGGGGCGCTTGTTACCAC---CCTGGTCCACATAACGTGCGGTGTTGTTAA 4838
Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857
| || | |||||||||| ||| || | ||| || || || || ||| ||
Sbjct 4837 ACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAAC 4778
Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917
| || |||||| ||||| || | ||| |||||||| || ||| || |
Sbjct 4777 CGGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGG 4718
Query 110918 CACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976
|||| ||| |||| ||| |||||||||| ||||| ||||| | | ||| ||
Sbjct 4717 CACAGGTCT-TGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGG 4659
Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036
|||||||| | | ||| || | || || | |||||||| || || || | || |||
Sbjct 4658 AAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 4599
Query 111037 ATGAACAGACCTTGGGACATCTTGTTGTATGTGTC 111071
|||| |||||||||| || |||||| ||
Sbjct 4598 GTGAAGTACTTTTGGGACATCAAGTGGTATGTCTC 4564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972848978400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |