Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq198 244 1e-59 seq121 118 1e-21 seq67 109 6e-19 >seq198 Length=8267 Score = 244 bits (270), Expect = 1e-59 Identities = 579/868 (67%), Gaps = 19/868 (2%) Strand=Plus/Minus Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 |||||| | || ||||||| || |||| |||||||||||| |||||| | | Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | ||| || || |||| ||| || || ||| || |||| ||||| ||||| Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| |||||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 106682 || |||||| || | ||| | | || | | || | |||| || |||| || |||| Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 5132 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 || ||||||||| | |||||| || || ||||| ||||| | || | || || | Sbjct 5131 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5072 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | |||| | || ||||| || | ||| | ||| |||| || ||||||||||| | Sbjct 5071 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 5012 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862 | || || ||||||| | | || || || | | ||| |||| || | ||| || | Sbjct 5011 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 4952 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | || | || |||||||| | || ||| |||||||| ||||| || |||| || | Sbjct 4951 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 4892 Query 106923 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976 | || ||| | ||| | || | ||||| || || ||| |||||| | Sbjct 4891 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 4835 Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 107036 | || ||||| |||| |||||| | || || || || || ||| ||| Sbjct 4834 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 4775 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 | || | | |||| | | || ||||| ||||| ||| ||||| |||| Sbjct 4774 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 4715 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 | | | ||||| |||| ||||| | || ||| | | | | | ||||||| Sbjct 4714 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 4655 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 || | | ||| ||| || ||| | |||||||| || || || | |||||| ||| Sbjct 4654 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4595 Query 107217 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 | ||| |||||||||| || ||||||||| | | | |||||||| || ||||| Sbjct 4594 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4536 Query 107276 ATGCCGATGGCCACACGCATAAACATGT 107303 || |||| || |||||||| | || || Sbjct 4535 ATTCCGACAGCAACACGCATCAGCAAGT 4508 >seq121 Length=54253 Score = 118 bits (130), Expect = 1e-21 Identities = 302/453 (67%), Gaps = 29/453 (6%) Strand=Plus/Plus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 || ||||| || || ||||| | ||| || | ||||| | ||| ||||| || | Sbjct 12636 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 12695 Query 9252 GCGATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9308 || | |||||| | || ||| ||| |||||||||||||| || | || ||| Sbjct 12696 GCCAAGACAACCA---CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGG 12752 Query 9309 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT--- 9363 || | ||| ||| |||||||| || | ||||||| | | | ||||| Sbjct 12753 TTGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGA 12806 Query 9364 ----TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 |||| | |||||||| ||||||||||||| || || || ||| | |||||| Sbjct 12807 GACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCG 12866 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 || | ||||||||||| || | || || ||||| |||||||| || ||||| | Sbjct 12867 GTTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCG 12926 Query 9480 G--CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | | | ||| || | ||| || || |||||||| ||| |||| || || | Sbjct 12927 GAACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCA 12984 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-- 9595 |||||||| ||||| || ||| | ||| | |||||| || |||||||| || || Sbjct 12985 ATGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCA 13044 Query 9596 ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAA 9628 ||||| | | | ||| ||||||| ||| || Sbjct 13045 ACTTC--TCGAACCGCTCGGGTTGCTGGAGGAA 13075 >seq67 Length=141994 Score = 109 bits (120), Expect = 6e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||||||||||||||| ||||| || | || || ||||| || || Sbjct 89932 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 89991 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| || || |||||||||| ||| | || | | |||||| ||||||||||||||| Sbjct 89992 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 90051 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||||||| || || |||| || ||| ||||||| Sbjct 90052 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 90091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977643602720