Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq12 96.9 3e-14
>seq12
Length=470192
Score = 96.9 bits (106), Expect = 3e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| || || || ||| || || |||||||| | || || |
Sbjct 270981 AGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGA 271040
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||| ||||| || ||||||||||| || || | |||||| ||||| ||||| || ||
Sbjct 271041 CCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCC 271100
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
||||||||||| || || || || || ||||| | ||| | | ||| || ||
Sbjct 271101 TTATCTTGAATCTTGGACTTCACATTATCGATAGTATC-GGATGACTCGACTTCAAGTGT 271159
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||| || || || || || || |||||||| ||||||
Sbjct 271160 GATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 271199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029273365429720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |