Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq198 215 1e-50 seq67 125 1e-23 >seq198 Length=8267 Score = 215 bits (238), Expect = 1e-50 Identities = 724/1118 (65%), Gaps = 33/1118 (3%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| |||| |||||||||||||||| |||||| |||||||| ||||||||||| Sbjct 5627 GTCAAGGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGTTGTCTGGCCTCGGGA 5568 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || ||| |||| |||||| | | || | || || || || | || |||| | || Sbjct 5567 GAGTCGAACGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGAGCG 5508 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||| | ||| | |||| ||| || || ||||| || |||||| || Sbjct 5507 ATGGGGCGGTGACGGAAGTTGCTCTTCTTCGCCTCAGGAACGGGGTAGTAGTTGATATCA 5448 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||| || || | || || | || |||||| ||||| | || Sbjct 5447 ATGATCTTGTTCAGATTGTGCACGAGAACCTGGACGACCTCGTGGAGCTTGCCGAAAT-- 5390 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 | ||||||| ||| | || | || ||| | | | ||||| | ||| Sbjct 5389 ----CATACTCGCC----TCGCGCAGAG--TCGACATAGGTGGGGAGGGCGAGAGAAGCC 5340 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT- 221775 ||||| || || |||||||| || | | |||| || ||||| || || ||||| Sbjct 5339 AGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCGATAATCTCAGTGCACAGGTTA 5280 Query 221776 --GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||||| || || ||||||| || || ||| ||| ||| ||| |||||| Sbjct 5279 GAGCTGCGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTG 5223 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 |||||||| ||||| |||||||| ||| ||| | ||||| || |||||| | | Sbjct 5222 TAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAGCT-T 5164 Query 221894 CTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 ||| || | | ||| | | | ||||| || || ||| || ||||| Sbjct 5163 CTGAGCCTTGATGGTCTTGCGGCCACGGCCCTC---CTGCTCGTACTTGGCGTAGAGAGC 5107 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 || |||| |||||||| | || | ||||| || | ||| || | || | Sbjct 5106 CTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAGAGCGT 5047 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| |||| | | ||| | || ||||||||| || ||| ||||||| || | || Sbjct 5046 CCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCGTAGAA 4987 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 || || | | || ||||||| |||| || || | |||||| | ||||| || Sbjct 4986 AAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAACTCGAA 4927 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | || ||||||||||||||||| |||| ||| | || ||||| |||||||| ||||| Sbjct 4926 GACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCACC 4867 Query 222193 CTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251 ||| |||| ||| | | | | ||| || | || || | || || | ||||||| Sbjct 4866 CTGGTCCA-CATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGG 4808 Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACAT-- 222309 | |||||||| || |||||| | |||| || | | | || ||||| Sbjct 4807 AGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATG----CGGTGGACATTG 4752 Query 222310 --GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 ||||||||||| ||| || ||||||||||| ||| |||||||||| || || Sbjct 4751 AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 4692 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 ||||| || ||| | | |||| | ||| || ||||| | | ||| | || || Sbjct 4691 CCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGGGGA 4632 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487 | | ||| || ||||| ||||| |||||| || ||||| ||||||| | | Sbjct 4631 GTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGTGG 4572 Query 222488 TACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 || ||||| | | | | | |||| || |||||||| Sbjct 4571 TATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAAT 4534 >seq67 Length=141994 Score = 125 bits (138), Expect = 1e-23 Identities = 296/448 (66%), Gaps = 11/448 (2%) Strand=Plus/Minus Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937 ||| ||||| ||||| || ||||||||||| ||||| ||| ||| || || || |||| Sbjct 90081 GCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCAT 90022 Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCA 25996 ||||||||| ||| || || ||||| || || ||||| ||||||||| | ||| Sbjct 90021 CTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTC-ACTTTCTCCAACGAGTTGATCT 89963 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | | || ||||||||||||| || ||||| || ||||| | | | |||| || || Sbjct 89962 CCCGTGATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTC---CCACATGAACC 89906 Query 26057 ACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGG 26116 || || | || || | |||||| |||||||| | |||||| ||| Sbjct 89905 ACCGCCCCGACCCCAAGGTGGTTGAGGATATCATTGTCGAGGCTGTCGGAATCGAGCAGG 89846 Query 26117 AGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCC 26176 |||| | | ||||||||| || || ||| || Sbjct 89845 AGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGTGCG 89786 Query 26177 AATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTAC 26235 | |||||||||| || || |||| ||||| ||| | || || | | |||| Sbjct 89785 AGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGC-CCTCGGCAACAAGAAGTACTAC 89727 Query 26236 AGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 | |||| | ||||| |||||||| ||||| ||| || |||| || |||||||||| Sbjct 89726 A--ACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACT 89669 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||| |||||| | ||||| ||||| || Sbjct 89668 TCTTCGAAAAGCGTGTCGGTGACTACCA 89641 Score = 87.8 bits (96), Expect = 3e-12 Identities = 175/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||||||||| ||||| ||||| Sbjct 90541 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATCTT 90482 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATT--TTC-TCAAG 25593 ||||||| | ||| |||| || | | || ||||| ||| || ||| || Sbjct 90481 TCCAAGGATCTTCACGACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTCGTCTCC 90422 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || ||||| || ||||| || |||||||| || ||| | Sbjct 90421 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTTGAGCGC 90362 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || || ||| | |||||| || |||||||| |||||||| || Sbjct 90361 TTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 90302 Query 25714 GAAAATGTGCACTCTGA 25730 || || | |||||||| Sbjct 90301 GAGAACATCCACTCTGA 90285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839830680320