Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq67 125 9e-23
seq198 120 4e-21
seq39 113 6e-19
seq17 105 8e-17
seq1 93.3 5e-13
>seq67
Length=141994
Score = 125 bits (138), Expect = 9e-23
Identities = 175/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| ||||| |||||||||||||| | | |||||
Sbjct 89635 GCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATG 89694
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | |
Sbjct 89695 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 89754
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| ||||| ||||||| |||||| || |||||||||||| |
Sbjct 89755 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC 89814
Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| ||| | || || | || | | ||||| | |||||| |||| |||||||| ||
Sbjct 89815 AG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAAT 89873
Query 868930 GAT 868932
|||
Sbjct 89874 GAT 89876
>seq198
Length=8267
Score = 120 bits (132), Expect = 4e-21
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448
||||| || ||||| || || ||||||| |||||| || || | | |||| |
Sbjct 5078 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 5019
Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508
|| ||||| || |||||||| ||||| || ||||| || || || |||||||||
Sbjct 5018 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 4959
Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568
||||| ||||| || ||||| | |||| | ||||||||||||||||||||||||
Sbjct 4958 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 4899
Query 1628569 CAGGCAAAGGCGCCCTTGCGCTTG 1628592
||||||||| || |||||||
Sbjct 4898 ATGGCAAAGGCACCGGGGCGCTTG 4875
>seq39
Length=220419
Score = 113 bits (124), Expect = 6e-19
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||| | || |||||| | || || || | || ||||| | || ||||||
Sbjct 81887 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 81946
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
|||||||||||||| || || |||||||||||||||||||| |||||| || |||
Sbjct 81947 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 82001
>seq17
Length=409253
Score = 105 bits (116), Expect = 8e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || || || |||||| ||||||||||| | || || || |||
Sbjct 142694 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCTGTGGGACTAGGTGAG 142753
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| || ||| | || ||| ||||| |||||| ||||| ||||| || |||
Sbjct 142754 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 142813
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192
||||| |||||||| ||| ||| ||
Sbjct 142814 AAGGGCTTCGAGATCGGCTCCGGCTT 142839
Score = 91.5 bits (100), Expect = 2e-12
Identities = 215/320 (67%), Gaps = 10/320 (3%)
Strand=Plus/Plus
Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157
||||||||||||| | || | |||||||||||| |||| || || ||| | ||
Sbjct 142008 TGGCGAGTCGCAC-TGTCGCTCTGTCGGCTGCATCGTCGATGGATGTCCTCCGGGATTGG 142066
Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217
||| ||||||||||||| ||||| || || |||||||| || ||||| |||| |
Sbjct 142067 AACTCACCGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCTGGCCAAAGCGCTC 142126
Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277
| | || ||||| | ||| || || ||| |||||||| ||||| ||| |||
Sbjct 142127 TCACTACCCCGCGGGATGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGTA 142186
Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337
|||| || || | || | | | | | || ||| |||||||| ||| ||||
Sbjct 142187 TCACTCTTGGTACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGCCCCAAGGACT 142246
Query 18338 ATTCCGACATGTGCAAGG----TG---CCGCGGCCCTCACACGCCGACTACACCTACATG 18390
| || || | ||| | || || || || || ||||||| ||||||| |
Sbjct 142247 ACGGCGGCA-GCACAATGGACCTGTACCCTCGCCCTAGCCATGCCGACTTCACCTACCTT 142305
Query 18391 GCCAAGTACGGCATCAAGGC 18410
| ||||||||| |||||||
Sbjct 142306 GAGAAGTACGGCGTCAAGGC 142325
>seq1
Length=1005209
Score = 93.3 bits (102), Expect = 5e-13
Identities = 241/365 (66%), Gaps = 3/365 (1%)
Strand=Plus/Minus
Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744
|| || || | |||||||| | ||| || | || | || | | || |||||||||
Sbjct 545400 TGGGGGTGCGAGGCGGCGCCGATGGCATCCACGGCAACGGTCAGGTTGCCATCGGTGCCG 545341
Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804
|||||| ||||||||| | | ||| |||| || | ||||||||||| ||| ||||
Sbjct 545340 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGCAGCTGAGACTCG 545281
Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGCCACCAGA 1726864
|| ||||| ||||| | ||||| || | || || || | || | | |
Sbjct 545280 GTGGTGCGGGCGCCGATTGCGCCGAGCGAAATCAAATCCGCTAGGTACTGTGGGGAGATG 545221
Query 1726865 GGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGG 1726924
| | || | ||| ||| | |||| | | || || | |||||| ||||
Sbjct 545220 GTATCTAGCATCTCTGAGGCAATGGGCAGGCC--CGTGCTCGTC-AGATCGGTGTACAGC 545164
Query 1726925 CGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTG 1726984
|| ||| | ||| || | | | | | | | | |||||| |||||||||| ||
Sbjct 545163 TTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGTCGTTG 545104
Query 1726985 GCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACG 1727044
|| ||||||||| ||||| || ||||| |||||||| | ||||||||||||| ||||
Sbjct 545103 ATCAAGCCCTTCCAGCCGACCGTTGTGCGGGGCTTTTCCAGGTAGGCGCGCATGATCACG 545044
Query 1727045 CAAAG 1727049
|| ||
Sbjct 545043 CAGAG 545039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107104076315676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |