Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq67 125 9e-23 seq198 120 4e-21 seq39 113 6e-19 seq17 105 8e-17 seq1 93.3 5e-13 >seq67 Length=141994 Score = 125 bits (138), Expect = 9e-23 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||||| |||||||||||||| | | ||||| Sbjct 89635 GCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATG 89694 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 89695 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 89754 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| ||||||| |||||| || |||||||||||| | Sbjct 89755 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC 89814 Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || ||| | || || | || | | ||||| | |||||| |||| |||||||| || Sbjct 89815 AG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAAT 89873 Query 868930 GAT 868932 ||| Sbjct 89874 GAT 89876 >seq198 Length=8267 Score = 120 bits (132), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448 ||||| || ||||| || || ||||||| |||||| || || | | |||| | Sbjct 5078 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 5019 Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508 || ||||| || |||||||| ||||| || ||||| || || || ||||||||| Sbjct 5018 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 4959 Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 ||||| ||||| || ||||| | |||| | |||||||||||||||||||||||| Sbjct 4958 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 4899 Query 1628569 CAGGCAAAGGCGCCCTTGCGCTTG 1628592 ||||||||| || ||||||| Sbjct 4898 ATGGCAAAGGCACCGGGGCGCTTG 4875 >seq39 Length=220419 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || |||||| | || || || | || ||||| | || |||||| Sbjct 81887 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 81946 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || || |||||||||||||||||||| |||||| || ||| Sbjct 81947 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 82001 >seq17 Length=409253 Score = 105 bits (116), Expect = 8e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || |||||| ||||||||||| | || || || ||| Sbjct 142694 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCTGTGGGACTAGGTGAG 142753 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 142754 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 142813 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||||| ||| ||| || Sbjct 142814 AAGGGCTTCGAGATCGGCTCCGGCTT 142839 Score = 91.5 bits (100), Expect = 2e-12 Identities = 215/320 (67%), Gaps = 10/320 (3%) Strand=Plus/Plus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||||||| | || | |||||||||||| |||| || || ||| | || Sbjct 142008 TGGCGAGTCGCAC-TGTCGCTCTGTCGGCTGCATCGTCGATGGATGTCCTCCGGGATTGG 142066 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 ||| ||||||||||||| ||||| || || |||||||| || ||||| |||| | Sbjct 142067 AACTCACCGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCTGGCCAAAGCGCTC 142126 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 | | || ||||| | ||| || || ||| |||||||| ||||| ||| ||| Sbjct 142127 TCACTACCCCGCGGGATGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGTA 142186 Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337 |||| || || | || | | | | | || ||| |||||||| ||| |||| Sbjct 142187 TCACTCTTGGTACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGCCCCAAGGACT 142246 Query 18338 ATTCCGACATGTGCAAGG----TG---CCGCGGCCCTCACACGCCGACTACACCTACATG 18390 | || || | ||| | || || || || || ||||||| ||||||| | Sbjct 142247 ACGGCGGCA-GCACAATGGACCTGTACCCTCGCCCTAGCCATGCCGACTTCACCTACCTT 142305 Query 18391 GCCAAGTACGGCATCAAGGC 18410 | ||||||||| ||||||| Sbjct 142306 GAGAAGTACGGCGTCAAGGC 142325 >seq1 Length=1005209 Score = 93.3 bits (102), Expect = 5e-13 Identities = 241/365 (66%), Gaps = 3/365 (1%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | ||| || | || | || | | || ||||||||| Sbjct 545400 TGGGGGTGCGAGGCGGCGCCGATGGCATCCACGGCAACGGTCAGGTTGCCATCGGTGCCG 545341 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| || | ||||||||||| ||| |||| Sbjct 545340 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGCAGCTGAGACTCG 545281 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGCCACCAGA 1726864 || ||||| ||||| | ||||| || | || || || | || | | | Sbjct 545280 GTGGTGCGGGCGCCGATTGCGCCGAGCGAAATCAAATCCGCTAGGTACTGTGGGGAGATG 545221 Query 1726865 GGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGG 1726924 | | || | ||| ||| | |||| | | || || | |||||| |||| Sbjct 545220 GTATCTAGCATCTCTGAGGCAATGGGCAGGCC--CGTGCTCGTC-AGATCGGTGTACAGC 545164 Query 1726925 CGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTG 1726984 || ||| | ||| || | | | | | | | | |||||| |||||||||| || Sbjct 545163 TTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGTCGTTG 545104 Query 1726985 GCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACG 1727044 || ||||||||| ||||| || ||||| |||||||| | ||||||||||||| |||| Sbjct 545103 ATCAAGCCCTTCCAGCCGACCGTTGTGCGGGGCTTTTCCAGGTAGGCGCGCATGATCACG 545044 Query 1727045 CAAAG 1727049 || || Sbjct 545043 CAGAG 545039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107104076315676