Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 1e-19
>seq12
Length=470192
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || ||||| || || ||||| || || || || | | ||| || | || |
Sbjct 271411 AAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCGACAAC 271352
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || ||||||||| ||||| || || || || || || || || ||||||||||||
Sbjct 271351 GTGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATCTTT 271292
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||| || ||||||||||| | | | |||| || |||||||| || || || ||
Sbjct 271291 GCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAAGAGTCC 271232
Query 24899 ACACTACACTTGGT 24912
|| |||||||||||
Sbjct 271231 ACTCTACACTTGGT 271218
Score = 105 bits (116), Expect = 6e-18
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || ||||| || || ||||| || | ||
Sbjct 271198 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 271139
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| ||||| || || || || || || || ||
Sbjct 271138 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 271079
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|||||| | ||||||||||| || ||||| |||||| ||| | || | || ||||| |
Sbjct 271078 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCG-CACAC-TTTCCGATTACA 271021
Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907
|||| || |||||||| ||||| |||
Sbjct 271020 ACATCCAGAAGGAATCCACACTCCAC 270995
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | ||||| || ||||| || || || || || | |
Sbjct 270970 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 270911
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 270910 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 270851
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || |||||||||||| | | | || || || |||
Sbjct 270850 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACAAC 270791
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || ||| |||||||||| |||| || |||
Sbjct 270790 ATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGC 270743
Score = 89.7 bits (98), Expect = 5e-13
Identities = 134/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || || || || || || || || || ||| ||| || | || | || || |
Sbjct 271688 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 271629
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || || ||||||||||||||||| ||
Sbjct 271628 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAAG 271569
Query 24848 CAGCTGGAGGA--TTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905
||||| ||||| ||| | || |||| || |||||||| || ||||| || || || |
Sbjct 271568 CAGCTCGAGGACGGTCG-CACAC-TGTCCGACTATAACATCCAGAAGGAGTCCACTCTCC 271511
Query 24906 ACTTGGT 24912
| ||||
Sbjct 271510 ATCTGGT 271504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895193047840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |