Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq67 131 3e-24
seq198 129 9e-24
seq39 118 2e-20
seq32 102 1e-15
>seq67
Length=141994
Score = 131 bits (144), Expect = 3e-24
Identities = 181/251 (72%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| ||||| |||||||||||||| | |
Sbjct 89627 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCA 89686
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||| ||||||| | ||| ||||||| | ||||| ||||| | ||||
Sbjct 89687 AGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 89746
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||||||||||| |||||||| |||||||||| |||||| || ||||||||
Sbjct 89747 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCA 89806
Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||| | || ||| | ||| || | || ||| ||||| | |||||| |||| |||
Sbjct 89807 TGCCAAGCAG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCC 89865
Query 794130 TCGATGATGAT 794140
|||| |||||
Sbjct 89866 TCGACAATGAT 89876
Score = 87.8 bits (96), Expect = 3e-11
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||||| |||||| |||||||| || |||||||| || ||||||||||| || ||
Sbjct 90246 GGCTCCTTGATGTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATC 90305
Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666
|||||||||||| || |||||
Sbjct 90306 ATGATCTGGAAGCCGTAGAAGCA 90328
>seq198
Length=8267
Score = 129 bits (142), Expect = 9e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860
||||| || ||||| ||||| ||||||| |||||| ||| | | | ||||| |
Sbjct 5078 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 5019
Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920
|| || || ||| |||||||| |||| || || || || || || |||||||||
Sbjct 5018 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 4959
Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980
||||| ||||| ||| ||||| | |||| || ||||||||||||||||||||||||
Sbjct 4958 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 4899
Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTG 2072004
||||||||| || |||||||
Sbjct 4898 ATGGCAAAGGCACCGGGGCGCTTG 4875
>seq39
Length=220419
Score = 118 bits (130), Expect = 2e-20
Identities = 95/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||||||| | || |||||| ||||||| || | || ||||| ||||| ||||||
Sbjct 81887 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 81946
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||| || || ||||| |||||||||||||| |||||| || |||
Sbjct 81947 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 82001
>seq32
Length=252927
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | |
Sbjct 226527 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 226468
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| ||||| || | |||||||||||| |||| ||| ||| |||||| || |
Sbjct 226467 GATGAGGCGAACAGAGGTCTGGATCTCCCGGGACGAGATAGTGGACTTCTTGTT-GTAAG 226409
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| || |||| |||||
Sbjct 226408 CAGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAAATGTC 226366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916200871687892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |