Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq67 131 3e-24 seq198 129 9e-24 seq39 118 2e-20 seq32 102 1e-15 >seq67 Length=141994 Score = 131 bits (144), Expect = 3e-24 Identities = 181/251 (72%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| ||||| |||||||||||||| | | Sbjct 89627 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCA 89686 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 89687 AGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 89746 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| |||||||||| |||||| || |||||||| Sbjct 89747 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCA 89806 Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 |||| | || ||| | ||| || | || ||| ||||| | |||||| |||| ||| Sbjct 89807 TGCCAAGCAG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCC 89865 Query 794130 TCGATGATGAT 794140 |||| ||||| Sbjct 89866 TCGACAATGAT 89876 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||| |||||||| || |||||||| || ||||||||||| || || Sbjct 90246 GGCTCCTTGATGTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATC 90305 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 |||||||||||| || ||||| Sbjct 90306 ATGATCTGGAAGCCGTAGAAGCA 90328 >seq198 Length=8267 Score = 129 bits (142), Expect = 9e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || ||||| ||||| ||||||| |||||| ||| | | | ||||| | Sbjct 5078 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 5019 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || || || ||| |||||||| |||| || || || || || || ||||||||| Sbjct 5018 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 4959 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||| ||||| ||| ||||| | |||| || |||||||||||||||||||||||| Sbjct 4958 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 4899 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTG 2072004 ||||||||| || ||||||| Sbjct 4898 ATGGCAAAGGCACCGGGGCGCTTG 4875 >seq39 Length=220419 Score = 118 bits (130), Expect = 2e-20 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||| | || |||||| ||||||| || | || ||||| ||||| |||||| Sbjct 81887 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 81946 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||| || || ||||| |||||||||||||| |||||| || ||| Sbjct 81947 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 82001 >seq32 Length=252927 Score = 102 bits (112), Expect = 1e-15 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | | Sbjct 226527 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 226468 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| ||||| || | |||||||||||| |||| ||| ||| |||||| || | Sbjct 226467 GATGAGGCGAACAGAGGTCTGGATCTCCCGGGACGAGATAGTGGACTTCTTGTT-GTAAG 226409 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | ||||| | ||||||||| ||| || |||| ||||| Sbjct 226408 CAGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAAATGTC 226366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916200871687892