Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq12 98.7 7e-16
>seq12
Length=470192
Score = 98.7 bits (108), Expect = 7e-16
Identities = 135/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||| ||| |||||| ||| || || ||||| || ||||| |||||||| |||| ||
Sbjct 271504 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 271563
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || ||||||||||| |||||||||||||| || | || | || || |||||
Sbjct 271564 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 271623
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || || | |||| ||| | ||| ||||| || || || |||| ||||| || ||
Sbjct 271624 ATCTT-TGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 271682
Query 33720 ACCTGT 33725
|| ||
Sbjct 271683 GCCAGT 271688
Score = 96.9 bits (106), Expect = 2e-15
Identities = 164/233 (70%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| ||||||| || ||||||||||| || || |||||||| || ||
Sbjct 270744 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 270803
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || |||| || || || || || || | ||||||||| || | ||
Sbjct 270804 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 270863
Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697
| ||| || ||||| ||| || || || || | ||| | |||||| ||| |
Sbjct 270864 ATACCCTCCTTGTCCTGAATCTTGCTCTT--GACGTTGTCGATGGTGTCTGAGCT---CT 270918
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||| || | ||||| || || || || || || || |||||||| ||||||
Sbjct 270919 CCACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATA 270971
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| ||||||||| |||||| || ||||| || || ||
Sbjct 271199 ACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGA 271258
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || |||| |||| || || |||||||| |||||||||||||| || | ||
Sbjct 271259 CAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGG 271318
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || || | || | ||| | ||| ||||| || || |
Sbjct 271319 AATGCCCTCCTTGTCCTGGATCTT-TGACTTCACGTTGTCGATGGTATCGCTAGACTCAA 271377
Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725
| |||| || || || || || ||
Sbjct 271378 CCTCAAGGGTAATGGTCTTTCCGGT 271402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702285397760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |