Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 7e-16 >seq12 Length=470192 Score = 98.7 bits (108), Expect = 7e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| |||||| ||| || || ||||| || ||||| |||||||| |||| || Sbjct 271504 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 271563 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || ||||||||||| |||||||||||||| || | || | || || ||||| Sbjct 271564 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 271623 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || | |||| ||| | ||| ||||| || || || |||| ||||| || || Sbjct 271624 ATCTT-TGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 271682 Query 33720 ACCTGT 33725 || || Sbjct 271683 GCCAGT 271688 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| ||||||| || ||||||||||| || || |||||||| || || Sbjct 270744 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 270803 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || || || || | ||||||||| || | || Sbjct 270804 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 270863 Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||| || ||||| ||| || || || || | ||| | |||||| ||| | Sbjct 270864 ATACCCTCCTTGTCCTGAATCTTGCTCTT--GACGTTGTCGATGGTGTCTGAGCT---CT 270918 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || | ||||| || || || || || || || |||||||| |||||| Sbjct 270919 CCACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATA 270971 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| ||||||||| |||||| || ||||| || || || Sbjct 271199 ACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGA 271258 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| |||| || || |||||||| |||||||||||||| || | || Sbjct 271259 CAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGG 271318 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | || | ||| | ||| ||||| || || | Sbjct 271319 AATGCCCTCCTTGTCCTGGATCTT-TGACTTCACGTTGTCGATGGTATCGCTAGACTCAA 271377 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | |||| || || || || || || Sbjct 271378 CCTCAAGGGTAATGGTCTTTCCGGT 271402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702285397760