Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 96.9 8e-15 >seq12 Length=470192 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || ||||| || ||||| | || ||||| || || ||| Sbjct 270967 CAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCAGAC 270908 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| || ||| || Sbjct 270907 ACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAGCAG 270848 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| |||| ||||| | ||| | | || |||||| || Sbjct 270847 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACAACATC 270788 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| ||||| ||||| || ||| | || || Sbjct 270787 CAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCG 270750 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| || || || Sbjct 271195 CAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCCGAT 271136 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || ||| || ||| ||| Sbjct 271135 ACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAGCAA 271076 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| |||||||||||| | || ||||| | || | ||||||||||| || Sbjct 271075 CGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAACATC 271016 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || || |||||||| Sbjct 271015 CAGAAGGAATCCACACTCCACCTTGT 270990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814319190188