Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq67 98.7 9e-16
seq198 87.8 2e-12
seq15 82.4 7e-11
>seq67
Length=141994
Score = 98.7 bits (108), Expect = 9e-16
Identities = 247/375 (66%), Gaps = 29/375 (8%)
Strand=Plus/Minus
Query 46908 GGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACAC 46967
||| ||||||| || || || ||| |||||||||||||| || || || || || |||
Sbjct 90002 GGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTGATGAGGGTCTCCAC 89943
Query 46968 ACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAAATTAAACTCGGACAC 47026
|| |||||||| ||||| || || | | | | || || | | | | |
Sbjct 89942 ACTGACTTTGCTTGTCTGCTGTT------CTCCC---------ACATGAACCACCGCCCC 89898
Query 47027 GATCCTGAGCATGTTTAGG-----------GAGGCGGTGAGCATCGAAAAGGAGTTTTTT 47075
|| || || ||| ||| ||||| || | ||||| ||||||| |
Sbjct 89897 GACCCCAAGGTGGTTGAGGATATCATTGTCGAGGCTGTCGGAATCGAGCAGGAGTTCCTC 89838
Query 47076 ACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATT 47135
|||| || || ||| || | |||| ||||||||||| || |||||||| || |||
Sbjct 89837 ACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGTGCGAGTACATT 89778
Query 47136 GAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGAAATATTTTAATGCTCG 47194
||||| || || || || ||| ||||| ||||| |||| ||| || | || |||
Sbjct 89777 GAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGTACTACAACGCTAC 89719
Query 47195 TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAA 47254
|| || || || || ||| | ||| || | | ||||| ||||| || ||||| ||
Sbjct 89718 CAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACTTCTTCGAAAA 89659
Query 47255 ACGAGTCGGAGAGTA 47269
|| ||||| || ||
Sbjct 89658 GCGTGTCGGTGACTA 89644
>seq198
Length=8267
Score = 87.8 bits (96), Expect = 2e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 148188 GAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAAT 148247
||| || ||||| ||||| || || | ||||| ||||| | | || ||||||||
Sbjct 4620 GAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGTGGTATGTCTCAAT 4561
Query 148248 AGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGG 148307
|| | || ||||| ||||||||||| || | || || ||||| |||| |||||| ||
Sbjct 4560 GGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 4501
Query 148308 TCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367
|| || ||||| | ||| ||| ||||| ||| |||||||| || | ||
Sbjct 4500 ACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCGAGGGTCTTAAATCC 4441
Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
||||| ||||| | || || | ||||| | || ||||
Sbjct 4440 GAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCG 4400
>seq15
Length=439316
Score = 82.4 bits (90), Expect = 7e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 131936 TTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATT 131995
|| || |||||||||||||||| ||| || ||| |||||||| || |||| ||||
Sbjct 139623 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 139682
Query 131996 AGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCC 132055
||||||||||| || || || ||||| || || || || || || | | ||
Sbjct 139683 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 139742
Query 132056 ACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAA 132115
| || ||| ||| ||| || |||| || | || ||||| ||||| || || | ||||
Sbjct 139743 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 139802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476608650130080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |