Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq67 170 3e-36 seq198 96.9 5e-14 >seq67 Length=141994 Score = 170 bits (188), Expect = 3e-36 Identities = 223/303 (74%), Gaps = 13/303 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||||||||||||| |||| | Sbjct 90542 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATC 90484 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGCT-GAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| |||| || |||||| ||||| | ||| Sbjct 90483 TTTCCAAGGATCTTCACG----ACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTC 90428 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || |||||||||||||| || ||||||| ||| || || || ||||||||| | Sbjct 90427 GTCTCCCACGTCCTCGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 90369 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | ||||| | |||||| || | || ||||| |||| || ||||| |||||||| Sbjct 90368 TGAGCGCTTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 90309 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||||||||||||||| || || ||||| |||||| ||||||| Sbjct 90308 CATGATGGAGAACATCCACTCTGAAACCTACTCTCTGCTCATCGATACCTACATCAAGGA 90249 Query 1456068 CCC 1456070 || Sbjct 90248 GCC 90246 Score = 123 bits (136), Expect = 4e-22 Identities = 188/260 (72%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581 ||||| |||||||| |||| |||||| | ||||| ||| || | || || | ||| Sbjct 89876 ATCATTGTCGAGGCTGTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGC 89817 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 || | ||||||||||||| ||| |||||| |||||||||| || ||||| |||||| Sbjct 89816 -CTGCTTGGCATGAACGCCAA-GCTGATGTGCGAGTACATTGAGTTC-GTCGCTGACCGC 89760 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 ||||| | ||| |||||| | ||||| ||||| | ||||||| ||| | || Sbjct 89759 CTGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCAT 89701 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGC 1456760 ||||| ||||| | | |||||||||||||| ||||| || || || || ||| Sbjct 89700 GGAGTCCATCTCCTTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTACCA 89641 Query 1456761 CAAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 89640 GAAGGCTGGTGTCATGGCCA 89621 >seq198 Length=8267 Score = 96.9 bits (106), Expect = 5e-14 Identities = 287/442 (65%), Gaps = 16/442 (4%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || ||||||||| ||||||||| |||||||||||||| || || | | Sbjct 4875 CAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 4934 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||| ||||| || ||||| || |||| || || || || Sbjct 4935 CCTCGATCTGCGCAAGAATCACGGTAA-GGAGGAGG-----TTCGCGCTCGTGACCTTTT 4988 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| |||||||| ||| || || ||| ||| | | | || | | |||||| | Sbjct 4989 CTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGAC 5048 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 |||||| ||||| ||||| || ||||| || ||| || | | || || || Sbjct 5049 GCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCGAGGC 5108 Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092 ||||| | | ||| |||| || | || | | Sbjct 5109 TCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 5165 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 | |||||| |||||| ||| |||||| | ||||| || | |||| |||| ||||||| Sbjct 5166 GCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 5225 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210 ||| || |||| || || |||||| |||||||||| || | || ||| | ||| Sbjct 5226 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 5283 Query 262211 CTGTGCACCGAGATCGTCCAGT 262232 |||||||| ||||| || ||| Sbjct 5284 CTGTGCACTGAGATTATCGAGT 5305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177769918613336