Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq198 181 1e-40
seq67 93.3 6e-14
>seq198
Length=8267
Score = 181 bits (200), Expect = 1e-40
Identities = 687/1067 (64%), Gaps = 16/1067 (1%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
||||| ||||| || | ||| |||||||| ||||| || || |||||||| || || ||
Sbjct 5270 ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 5211
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
|| ||||||| ||| |||| | |||| ||| | | ||| | | ||| || ||
Sbjct 5210 GGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGAT- 5152
Query 69472 ACGGTCTTGTA---ACGCTTCTCTTTTTCATATT--GTGTATATAGCCGTTCGAATTCAT 69526
||||||| ||| ||| | || || | | ||| | |||| ||||| ||||
Sbjct 5151 --GGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGAGCC--TCGAACTCAT 5096
Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586
| || | |||||| | | ||||| ||||| || || | | | ||| || | |
Sbjct 5095 CACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGT 5036
Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTG 69645
||| || || ||||| || |||||||| |||| ||||| || ||| || || |
Sbjct 5035 TGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCGTAGAAA-AGGTCACGA 4977
Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705
| | | || || || || ||| || |||||||| ||||| | | ||| |
Sbjct 4976 GCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCG 4917
Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765
||||| || || || || || || | | | || || || || || || ||||| || |
Sbjct 4916 TGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCACCCTGGTCCACA 4857
Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825
|| | || ||||| ||| | || | |||||| |||| |||||| || || || ||
Sbjct 4856 TAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTG 4797
Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCT 69885
||||||| ||| ||| || | |||||||| | | ||||| || || ||
Sbjct 4796 GTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCA 4737
Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945
|| | || ||||| | ||||| || | || ||||| |||||||| ||||| ||
Sbjct 4736 GCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCT 4677
Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005
| ||| || || || || || | | || | || ||| | ||||| ||
Sbjct 4676 GCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAAC 4617
Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCT 70065
| || || || ||||||||||| | |||| || | || | |||||| ||||| ||
Sbjct 4616 AGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCC 4557
Query 70066 GATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124
|| || ||| | | | |||||||| | || |||||||||| || |||||||| ||
Sbjct 4556 TTCTCAATGTCCTCGCCG-TGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACG 4498
Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184
|| | || || || | |||||||| || || || ||||| || ||
Sbjct 4497 CTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCGAGGGTCTTAAATCCGAA 4438
Query 70185 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
|||||||| ||||| | ||||| | |||| | || || || | || || ||
Sbjct 4437 GTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTGAGCTCCTCGGCATGCTT 4378
Query 70245 GGTAACTATATCCATAACAGT-AGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303
|||| || | | || | | |||||| || |||| | ||| ||||| || |
Sbjct 4377 CATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGGCTTATTGTTTTTGGGGT 4319
Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363
| ||||| | | | | ||| || || ||| | |||||||||| |||||| |
Sbjct 4318 TGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTTTTTTGTTTGCTTGTGGA 4259
Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410
|| || | ||| || | || || ||||| || ||||| || |||
Sbjct 4258 GGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 4212
>seq67
Length=141994
Score = 93.3 bits (102), Expect = 6e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
|| || |||||| || || |||||||| | || || ||||| || || |||||
Sbjct 89929 CAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGA 89988
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
||||||||||| |||||||| || ||||| || |||| || || || || || ||||||
Sbjct 89989 CCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 90048
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|| || || || || || || ||||| ||
Sbjct 90049 ATACCCTCCACAGCGGCGAAGGCAACCAG 90077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686905125037920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |