Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq198 181 1e-40 seq67 93.3 6e-14 >seq198 Length=8267 Score = 181 bits (200), Expect = 1e-40 Identities = 687/1067 (64%), Gaps = 16/1067 (1%) Strand=Plus/Minus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 ||||| ||||| || | ||| |||||||| ||||| || || |||||||| || || || Sbjct 5270 ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 5211 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 || ||||||| ||| |||| | |||| ||| | | ||| | | ||| || || Sbjct 5210 GGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGAT- 5152 Query 69472 ACGGTCTTGTA---ACGCTTCTCTTTTTCATATT--GTGTATATAGCCGTTCGAATTCAT 69526 ||||||| ||| ||| | || || | | ||| | |||| ||||| |||| Sbjct 5151 --GGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGAGCC--TCGAACTCAT 5096 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | |||||| | | ||||| ||||| || || | | | ||| || | | Sbjct 5095 CACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGT 5036 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTG 69645 ||| || || ||||| || |||||||| |||| ||||| || ||| || || | Sbjct 5035 TGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCGTAGAAA-AGGTCACGA 4977 Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705 | | | || || || || ||| || |||||||| ||||| | | ||| | Sbjct 4976 GCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCG 4917 Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765 ||||| || || || || || || | | | || || || || || || ||||| || | Sbjct 4916 TGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCACCCTGGTCCACA 4857 Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825 || | || ||||| ||| | || | |||||| |||| |||||| || || || || Sbjct 4856 TAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTG 4797 Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCT 69885 ||||||| ||| ||| || | |||||||| | | ||||| || || || Sbjct 4796 GTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCA 4737 Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945 || | || ||||| | ||||| || | || ||||| |||||||| ||||| || Sbjct 4736 GCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCT 4677 Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005 | ||| || || || || || | | || | || ||| | ||||| || Sbjct 4676 GCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAAC 4617 Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCT 70065 | || || || ||||||||||| | |||| || | || | |||||| ||||| || Sbjct 4616 AGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCC 4557 Query 70066 GATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124 || || ||| | | | |||||||| | || |||||||||| || |||||||| || Sbjct 4556 TTCTCAATGTCCTCGCCG-TGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACG 4498 Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184 || | || || || | |||||||| || || || ||||| || || Sbjct 4497 CTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCGAGGGTCTTAAATCCGAA 4438 Query 70185 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 |||||||| ||||| | ||||| | |||| | || || || | || || || Sbjct 4437 GTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTGAGCTCCTCGGCATGCTT 4378 Query 70245 GGTAACTATATCCATAACAGT-AGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303 |||| || | | || | | |||||| || |||| | ||| ||||| || | Sbjct 4377 CATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGGCTTATTGTTTTTGGGGT 4319 Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363 | ||||| | | | | ||| || || ||| | |||||||||| |||||| | Sbjct 4318 TGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTTTTTTGTTTGCTTGTGGA 4259 Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 || || | ||| || | || || ||||| || ||||| || ||| Sbjct 4258 GGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 4212 >seq67 Length=141994 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || || |||||| || || |||||||| | || || ||||| || || ||||| Sbjct 89929 CAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGA 89988 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 ||||||||||| |||||||| || ||||| || |||| || || || || || |||||| Sbjct 89989 CCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 90048 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 90049 ATACCCTCCACAGCGGCGAAGGCAACCAG 90077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905125037920