Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq198 239 6e-58
seq67 109 7e-19
seq121 105 8e-18
>seq198
Length=8267
Score = 239 bits (264), Expect = 6e-58
Identities = 582/875 (67%), Gaps = 19/875 (2%)
Strand=Plus/Minus
Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279
|||||| | || ||||||| || |||| |||||||||||| |||||| | |
Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308
Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339
|||||| | ||| || || || | ||| || || ||| || |||| ||||| |||||
Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248
Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399
||||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| |
Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188
Query 111400 TTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 111455
| |||||| || | ||| | | || | | || | |||| || |||| || ||||
Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 5132
Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515
|| ||||||||| | |||||| || || ||||| ||||| | || | || || |
Sbjct 5131 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5072
Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575
| |||| | || ||||| || | ||| | ||| |||| || ||||||||||| |
Sbjct 5071 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 5012
Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635
| || || ||||||| | | || || || | | ||| |||| || | ||| || |
Sbjct 5011 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 4952
Query 111636 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695
| || | || |||||||| | || ||| |||||||| ||||| || |||| || |
Sbjct 4951 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 4892
Query 111696 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 111749
| || ||| | ||| | || | ||||| || || ||| |||||| |
Sbjct 4891 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 4835
Query 111750 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 111809
| || ||||| |||| |||||| | || || || || || ||| |||
Sbjct 4834 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 4775
Query 111810 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 111869
| || | | |||| | | || ||||| ||||| ||| ||||| ||||
Sbjct 4774 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 4715
Query 111870 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 111929
| | | ||||| |||| ||||| | || ||| | | | | | |||||||
Sbjct 4714 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 4655
Query 111930 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 111989
|| | | ||| ||| || ||| | |||||||| || || || | |||||| |||
Sbjct 4654 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4595
Query 111990 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 112048
| ||| |||||||||| || ||||||||| | | | |||||||| || |||||
Sbjct 4594 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4536
Query 112049 ATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|| |||| || || ||||| | || || ||| ||
Sbjct 4535 ATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 4501
>seq67
Length=141994
Score = 109 bits (120), Expect = 7e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||||||||||||||| ||||| || | || || ||||| |||||
Sbjct 89932 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 89991
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||| || || |||||||||| ||| | || | | |||||| |||||||||||||||
Sbjct 89992 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 90051
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
||||||||| || || |||| || || |||||||
Sbjct 90052 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 90091
>seq121
Length=54253
Score = 105 bits (116), Expect = 8e-18
Identities = 188/270 (70%), Gaps = 6/270 (2%)
Strand=Plus/Plus
Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 11679
||| || | ||||||||| ||||||||||||| || || || ||| | |||||| |
Sbjct 12809 CTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGGT 12868
Query 11680 TTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGC 11739
| | ||||||||||| || | || || ||||| |||||||| || ||||| | |
Sbjct 12869 TGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGGA 12928
Query 11740 GGCAGAG-CACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11798
|| | ||||| | ||| || || |||||||| || |||| || || | |
Sbjct 12929 ACCACTGACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAATG 12987
Query 11799 TCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACT 11856
|||| || ||||| || ||| | ||||| ||| || || || ||||| ||||| |||
Sbjct 12988 TCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAACT 13047
Query 11857 TCCAAAATATCTCTCGGGTTGCTTGAGAAA 11886
|| | | | ||||||||||| ||| ||
Sbjct 13048 TCTCGA--ACCGCTCGGGTTGCTGGAGGAA 13075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628028640028800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |