Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq198 239 6e-58 seq67 109 7e-19 seq121 105 8e-18 >seq198 Length=8267 Score = 239 bits (264), Expect = 6e-58 Identities = 582/875 (67%), Gaps = 19/875 (2%) Strand=Plus/Minus Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279 |||||| | || ||||||| || |||| |||||||||||| |||||| | | Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308 Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 |||||| | ||| || || || | ||| || || ||| || |||| ||||| ||||| Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188 Query 111400 TTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 111455 | |||||| || | ||| | | || | | || | |||| || |||| || |||| Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 5132 Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515 || ||||||||| | |||||| || || ||||| ||||| | || | || || | Sbjct 5131 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5072 Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575 | |||| | || ||||| || | ||| | ||| |||| || ||||||||||| | Sbjct 5071 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 5012 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635 | || || ||||||| | | || || || | | ||| |||| || | ||| || | Sbjct 5011 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 4952 Query 111636 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695 | || | || |||||||| | || ||| |||||||| ||||| || |||| || | Sbjct 4951 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 4892 Query 111696 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 111749 | || ||| | ||| | || | ||||| || || ||| |||||| | Sbjct 4891 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 4835 Query 111750 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 111809 | || ||||| |||| |||||| | || || || || || ||| ||| Sbjct 4834 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 4775 Query 111810 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 111869 | || | | |||| | | || ||||| ||||| ||| ||||| |||| Sbjct 4774 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 4715 Query 111870 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 111929 | | | ||||| |||| ||||| | || ||| | | | | | ||||||| Sbjct 4714 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 4655 Query 111930 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 111989 || | | ||| ||| || ||| | |||||||| || || || | |||||| ||| Sbjct 4654 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4595 Query 111990 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 112048 | ||| |||||||||| || ||||||||| | | | |||||||| || ||||| Sbjct 4594 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4536 Query 112049 ATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || |||| || || ||||| | || || ||| || Sbjct 4535 ATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 4501 >seq67 Length=141994 Score = 109 bits (120), Expect = 7e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||||||||||||||| ||||| || | || || ||||| ||||| Sbjct 89932 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 89991 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| || || |||||||||| ||| | || | | |||||| ||||||||||||||| Sbjct 89992 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 90051 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||||||| || || |||| || || ||||||| Sbjct 90052 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 90091 >seq121 Length=54253 Score = 105 bits (116), Expect = 8e-18 Identities = 188/270 (70%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 11679 ||| || | ||||||||| ||||||||||||| || || || ||| | |||||| | Sbjct 12809 CTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGGT 12868 Query 11680 TTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGC 11739 | | ||||||||||| || | || || ||||| |||||||| || ||||| | | Sbjct 12869 TGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGGA 12928 Query 11740 GGCAGAG-CACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11798 || | ||||| | ||| || || |||||||| || |||| || || | | Sbjct 12929 ACCACTGACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAATG 12987 Query 11799 TCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACT 11856 |||| || ||||| || ||| | ||||| ||| || || || ||||| ||||| ||| Sbjct 12988 TCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAACT 13047 Query 11857 TCCAAAATATCTCTCGGGTTGCTTGAGAAA 11886 || | | | ||||||||||| ||| || Sbjct 13048 TCTCGA--ACCGCTCGGGTTGCTGGAGGAA 13075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028640028800