Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq198 221 1e-52
seq67 132 6e-26
seq121 86.0 8e-12
>seq198
Length=8267
Score = 221 bits (244), Expect = 1e-52
Identities = 388/562 (69%), Gaps = 5/562 (1%)
Strand=Plus/Minus
Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753
|||||| | || ||||||| || ||||| || || |||| |||||| || |
Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308
Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813
|||||| ||||| || ||||||| ||| || || ||| || |||| |||||| || ||
Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248
Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873
||| |||| || ||||||||||| |||||| | || | || ||||| || ||||
Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188
Query 118874 CTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932
|| |||||| || | ||||| | || | || | | || | | | || ||||| |
Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCT 5129
Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992
||||||||| | |||||| || || ||||| ||||| | | || | || || || |
Sbjct 5128 GCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGG 5069
Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052
||| || ||||||||||| | ||| | ||| |||| || |||||||||||||| |
Sbjct 5068 CCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGAT 5009
Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112
| ||| |||| || || |||| || || ||| |||| | || || | || |||||
Sbjct 5008 CGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCT 4949
Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172
|||| || | || || | || ||| ||||||||||| |||||||| | || | |
Sbjct 4948 TGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGG 4889
Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229
|| || |||| |||||| ||||| | || ||| |||||| ||||| |
Sbjct 4888 CACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCA 4829
Query 119230 GCATTGGAATGATACCATCGGA 119251
|||| |||| ||||| | |||
Sbjct 4828 GCATAGGAACAATACCGTTGGA 4807
>seq67
Length=141994
Score = 132 bits (146), Expect = 6e-26
Identities = 305/457 (67%), Gaps = 18/457 (4%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||| ||||||||||| ||||| ||| ||||| ||| ||||||
Sbjct 89644 TAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATG 89703
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841
|| || || ||||| | | ||| | ||| || | | | | | ||
Sbjct 89704 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 89757
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
|| || || | |||| ||||||||||||| ||||| || || |||||| || | |||
Sbjct 89758 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGG 89817
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
|| || || ||||| || |||| ||| ||| || | ||||| || | |||
Sbjct 89818 CCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATA 89877
Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018
| | || || | | | || | | | || | | | ||| || |||
Sbjct 89878 TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGCA 89934
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || |||||||||||| ||||||||||| | || || ||||| ||||| |||
Sbjct 89935 AAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGC 89994
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138
|| || || |||||||||| |||||| || | |||||||| ||||||||||| |||
Sbjct 89995 ATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCC 90054
Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|||||| ||||| |||| |||||| ||| ||||
Sbjct 90055 TCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 90091
>seq121
Length=54253
Score = 86.0 bits (94), Expect = 8e-12
Identities = 326/504 (65%), Gaps = 27/504 (5%)
Strand=Plus/Plus
Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122
|| ||||| || || || || | ||| || | |||||| | ||| || || || |
Sbjct 12636 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 12695
Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180
|| | |||||| | ||| | | ||| || |||||||||||||| | | || |
Sbjct 12696 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 12753
Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACC--CGCACTGCGTTGCT---- 14234
||| || ||| |||||||| || || ||||| || | | |||||
Sbjct 12754 TGAGAGTGCTTTCACGTTCATCGTTTCCA------CCACCAACGTTCGACTTTGCTCGAG 12807
Query 14235 ---TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAA 14291
| || | || ||||||||||| ||||| | ||| || || ||| | |||||
Sbjct 12808 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 12867
Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351
| | |||| ||| || || | || |||||||| |||||||| || ||||| | ||
Sbjct 12868 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 12927
Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409
| | | ||| || | ||| || ||| |||||||| || |||| || || |
Sbjct 12928 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 12985
Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 14467
||||| || || || || |||| ||||| ||||||||| || ||| | ||||| |
Sbjct 12986 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 13045
Query 14468 CTGCCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTC 14527
|| | | | || || ||||| | |||||| |||| ||| | ||| ||||
Sbjct 13046 CTTC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 13103
Query 14528 GCGGCGTCGATGCCTTCAACGTCA 14551
|| |||| || || ||||||||
Sbjct 13104 GCTTCGTCCATACCAGCAACGTCA 13127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618431891371680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |