Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq198 221 1e-52 seq67 132 6e-26 seq121 86.0 8e-12 >seq198 Length=8267 Score = 221 bits (244), Expect = 1e-52 Identities = 388/562 (69%), Gaps = 5/562 (1%) Strand=Plus/Minus Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 |||||| | || ||||||| || ||||| || || |||| |||||| || | Sbjct 5367 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 5308 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 |||||| ||||| || ||||||| ||| || || ||| || |||| |||||| || || Sbjct 5307 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5248 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| |||| || ||||||||||| |||||| | || | || ||||| || |||| Sbjct 5247 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5188 Query 118874 CTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932 || |||||| || | ||||| | || | || | | || | | | || ||||| | Sbjct 5187 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCT 5129 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 ||||||||| | |||||| || || ||||| ||||| | | || | || || || | Sbjct 5128 GCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGG 5069 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 ||| || ||||||||||| | ||| | ||| |||| || |||||||||||||| | Sbjct 5068 CCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGAT 5009 Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112 | ||| |||| || || |||| || || ||| |||| | || || | || ||||| Sbjct 5008 CGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCT 4949 Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 4948 TGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGG 4889 Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 || || |||| |||||| ||||| | || ||| |||||| ||||| | Sbjct 4888 CACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCA 4829 Query 119230 GCATTGGAATGATACCATCGGA 119251 |||| |||| ||||| | ||| Sbjct 4828 GCATAGGAACAATACCGTTGGA 4807 >seq67 Length=141994 Score = 132 bits (146), Expect = 6e-26 Identities = 305/457 (67%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||| ||||||||||| ||||| ||| ||||| ||| |||||| Sbjct 89644 TAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATG 89703 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 89704 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 89757 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| ||||||||||||| ||||| || || |||||| || | ||| Sbjct 89758 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGG 89817 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| || |||| ||| ||| || | ||||| || | ||| Sbjct 89818 CCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATA 89877 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018 | | || || | | | || | | | || | | | ||| || ||| Sbjct 89878 TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGCA 89934 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||| ||||||||||| | || || ||||| ||||| ||| Sbjct 89935 AAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGC 89994 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||||| |||||| || | |||||||| ||||||||||| ||| Sbjct 89995 ATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCC 90054 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||||| ||||| |||| |||||| ||| |||| Sbjct 90055 TCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 90091 >seq121 Length=54253 Score = 86.0 bits (94), Expect = 8e-12 Identities = 326/504 (65%), Gaps = 27/504 (5%) Strand=Plus/Plus Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122 || ||||| || || || || | ||| || | |||||| | ||| || || || | Sbjct 12636 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 12695 Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180 || | |||||| | ||| | | ||| || |||||||||||||| | | || | Sbjct 12696 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 12753 Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACC--CGCACTGCGTTGCT---- 14234 ||| || ||| |||||||| || || ||||| || | | ||||| Sbjct 12754 TGAGAGTGCTTTCACGTTCATCGTTTCCA------CCACCAACGTTCGACTTTGCTCGAG 12807 Query 14235 ---TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAA 14291 | || | || ||||||||||| ||||| | ||| || || ||| | ||||| Sbjct 12808 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 12867 Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 | | |||| ||| || || | || |||||||| |||||||| || ||||| | || Sbjct 12868 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 12927 Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409 | | | ||| || | ||| || ||| |||||||| || |||| || || | Sbjct 12928 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 12985 Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 14467 ||||| || || || || |||| ||||| ||||||||| || ||| | ||||| | Sbjct 12986 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 13045 Query 14468 CTGCCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTC 14527 || | | | || || ||||| | |||||| |||| ||| | ||| |||| Sbjct 13046 CTTC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 13103 Query 14528 GCGGCGTCGATGCCTTCAACGTCA 14551 || |||| || || |||||||| Sbjct 13104 GCTTCGTCCATACCAGCAACGTCA 13127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431891371680