Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq12 208 2e-48 seq56 105 2e-17 >seq12 Length=470192 Score = 208 bits (230), Expect = 2e-48 Identities = 926/1454 (64%), Gaps = 23/1454 (2%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || ||| | || || || || || ||||| | ||| | | |||| | Sbjct 37965 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 37906 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| | || | Sbjct 37905 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCA 37846 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || |||| ||| || || | | Sbjct 37845 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCTATGAACCCCCACA 37786 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||| ||||| || |||||| | | || ||| | || Sbjct 37785 ACACTGTCTTCGATGCCAAGCGTCTCATTGGTCGTCGCTTCCAGGACGCTGAGGTC---- 37730 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || | ||| | || || | ||||| | || | | | ||| | | || || | Sbjct 37729 CAGGCCGATATGAAGCACTGGCCTTTCAAGGTCAT-CGAGAAGGC--TACCAAGCCCGTC 37673 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||||||| | || ||||| || || || || || || || || | ||| Sbjct 37672 ATCGAGGTTGAGTTCAAGGGTGAGGTCAAGCAGTTCACTCCTGAGGAGATCTCCGCCATG 37613 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || || ||| || | || || || || | |||| || || | | | ||| Sbjct 37612 ATCCTCGTCAAGATGCGCGAGACCGCCGAGGCTTACCTCGGTGGCACCGTCAATAACGCT 37553 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || |||||||| || ||||| || || || | |||||| || || || || || || Sbjct 37552 GTCATTACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGT 37493 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || || || | || || || || |||||||| || || ||||| Sbjct 37492 CTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCC 37433 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || ||||| || | | || || || |||| || || ||| | |||||| Sbjct 37432 TACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTTCTGATCTTCGATCTTGGTGGT 37373 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 |||||||| ||||| || || || || |||| ||||| || || || ||||| || || Sbjct 37372 GGTACTTTCGATGTTTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTTAAGGCCACC 37313 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || || | ||||| || || || || || ||||| || || || || Sbjct 37312 GCCGGTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC 37253 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | ||| || || | | || | ||||| Sbjct 37252 AACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTACCACCAACGCCCGTGCTCTCCGTCG 37194 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| |||||||| Sbjct 37193 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCTAT 37134 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 || || || ||||| || || || |||| | ||||| || ||||| || || Sbjct 37133 CGAGATCGACTCTCTCTTCGAGGGTGTCGACTTCTACACCTCTATCACCCGTGCCCGTTT 37074 Query 350092 TGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAA 350151 || || | || ||| || || | | || ||||| || || || || | Sbjct 37073 CGAGGAGCTCTGCCAGGACCTCTTCCGTGGTACCATGGAGCCCGTTGAGCGCGTCCTCCG 37014 Query 350152 AGATG-CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 || | ||| | || | | || | || | || | || | || |||||||| || | Sbjct 37013 TGACGCCAAGATTGACAAGTCCTCCG-TTCACGAGATTGTCCTTGTCGGTGGTTCCACCC 36955 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA-ACCTTCTAGA 350269 |||| || || | || || | | || || || || || ||| || || | || Sbjct 36954 GTATCCCCAAGATCCAGAAGCTCGTCTCCGACTTCTTCAA---CAAGGATGCCAACAAG- 36899 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 || || || || ||||| || ||||| || ||||| || || ||||| |||| | || Sbjct 36898 TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCTATCCTGTCC 36839 Query 350330 GGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || | || ||| || | | || | | || || ||||| | || ||||| Sbjct 36838 GGTGACCAGTCTTCCAAGTCTACCAACGAGATCCTGCTTCTCGATGTTGCCCCTCTTTCC 36779 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || | || || | |||| || |||||| | | ||| | || | ||| | Sbjct 36778 CTCGGTATTGAGACCGCCGGTGGTGTCATGACTCCTTTGATTAAGCGCAACACCACTATT 36719 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506 || || || |||||| | || || || || | | ||||| ||||| | || || Sbjct 36718 CCCACCAAGAAGTCCGAGACCTTCTCCACCTACTCTGATAACCAGCCCGGTGTCCTGATC 36659 Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566 || || || || ||||| ||||| ||||| || || || || || ||| | || Sbjct 36658 CAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTCCTCGGAAAGTTCGAA 36599 Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626 || | || ||||| || || | || ||||| ||| |||| ||| | |||||| || Sbjct 36598 CTTACTGGCATTCCCCCTGCCCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTCGATGTT 36539 Query 350627 GATTCAAATGGTAT 350640 ||| | || ||||| Sbjct 36538 GATGCCAACGGTAT 36525 Score = 190 bits (210), Expect = 6e-43 Identities = 183/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||||| | || ||||| || || || || || || || || || | Sbjct 270964 TTTGCATACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGT 271023 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | ||| || ||||| ||||| || ||||| |||||||| ||||||||||| | Sbjct 271024 AATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGT 271083 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| || || ||||| ||||| || | || |||||||| || | ||| |||| Sbjct 271084 CAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATG 271143 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||||||||| | ||||| ||||| ||||| || || ||||||||||| Sbjct 271144 ACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 271198 Score = 120 bits (132), Expect = 9e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||| |||||||| || || ||||| || Sbjct 271196 CATACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTC 271255 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || || || || || || |||||||| | ||| ||||| ||||| Sbjct 271256 AGACAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGG 271315 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || || || || || | ||| | || Sbjct 271316 GGGAATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTC 271375 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| ||||| |||| ||||||||||| || || || || Sbjct 271376 AACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGAC 271414 Score = 107 bits (118), Expect = 6e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | | || || || ||||| ||| || || || || || || || Sbjct 270744 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 270803 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || ||||| || || || || ||||| ||||| ||||| ||||| ||||||||| Sbjct 270804 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 270863 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || |||||||| || ||| || || || || || | || || || || Sbjct 270864 ATACCCTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCAC 270922 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | ||||||||||| | || || ||||| || ||||| Sbjct 270923 CTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970 >seq56 Length=172390 Score = 105 bits (116), Expect = 2e-17 Identities = 101/129 (78%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || || ||| ||||||| |||||||||||||||||||| || Sbjct 86385 CGGGGAACACCAAGCGTGACGTTC---TTAGATGACACACCAGCAAAGTGGAAAGTGTTC 86441 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||| || | |||||||| || ||||| || |||| |||||| |||||||| Sbjct 86442 AGTGTCATTTGCGTCGCAGGCTCACCGATAGACTGAGCGGCAAGAACGCCGACCATTTCA 86501 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 86502 CCAGGGTTG 86510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246090723684