Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq12 208 2e-48
seq56 105 2e-17
>seq12
Length=470192
Score = 208 bits (230), Expect = 2e-48
Identities = 926/1454 (64%), Gaps = 23/1454 (2%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
|||| | || || ||| | || || || || || ||||| | ||| | | |||| |
Sbjct 37965 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 37906
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
| | ||||| || || || || || |||||| | || || || || | ||| | || |
Sbjct 37905 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCA 37846
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| || |||||| | || |||||| | || || || |||| ||| || || | |
Sbjct 37845 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCTATGAACCCCCACA 37786
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432
| || || || ||||| ||||| || |||||| | | || ||| | ||
Sbjct 37785 ACACTGTCTTCGATGCCAAGCGTCTCATTGGTCGTCGCTTCCAGGACGCTGAGGTC---- 37730
Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492
|| | ||| | || || | ||||| | || | | | ||| | | || || |
Sbjct 37729 CAGGCCGATATGAAGCACTGGCCTTTCAAGGTCAT-CGAGAAGGC--TACCAAGCCCGTC 37673
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
|| |||||||| | || ||||| || || || || || || || || | |||
Sbjct 37672 ATCGAGGTTGAGTTCAAGGGTGAGGTCAAGCAGTTCACTCCTGAGGAGATCTCCGCCATG 37613
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
| | || || ||| || | || || || || | |||| || || | | | |||
Sbjct 37612 ATCCTCGTCAAGATGCGCGAGACCGCCGAGGCTTACCTCGGTGGCACCGTCAATAACGCT 37553
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
|| |||||||| || ||||| || || || | |||||| || || || || || ||
Sbjct 37552 GTCATTACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGT 37493
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
|||||| || | || || || | || || || || |||||||| || || |||||
Sbjct 37492 CTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCC 37433
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || ||||| || | | || || || |||| || || ||| | ||||||
Sbjct 37432 TACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTTCTGATCTTCGATCTTGGTGGT 37373
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
|||||||| ||||| || || || || |||| ||||| || || || ||||| || ||
Sbjct 37372 GGTACTTTCGATGTTTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTTAAGGCCACC 37313
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912
|| ||||| || || | ||||| || || || || || ||||| || || || ||
Sbjct 37312 GCCGGTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC 37253
Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971
|| || || ||||| ||||| || | ||| || || | | || | |||||
Sbjct 37252 AACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTACCACCAACGCCCGTGCTCTCCGTCG 37194
Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031
|| | || || || || ||||| |||||| || | || || || |||| ||||||||
Sbjct 37193 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCTAT 37134
Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091
|| || || ||||| || || || |||| | ||||| || ||||| || ||
Sbjct 37133 CGAGATCGACTCTCTCTTCGAGGGTGTCGACTTCTACACCTCTATCACCCGTGCCCGTTT 37074
Query 350092 TGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAA 350151
|| || | || ||| || || | | || ||||| || || || || |
Sbjct 37073 CGAGGAGCTCTGCCAGGACCTCTTCCGTGGTACCATGGAGCCCGTTGAGCGCGTCCTCCG 37014
Query 350152 AGATG-CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210
|| | ||| | || | | || | || | || | || | || |||||||| || |
Sbjct 37013 TGACGCCAAGATTGACAAGTCCTCCG-TTCACGAGATTGTCCTTGTCGGTGGTTCCACCC 36955
Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA-ACCTTCTAGA 350269
|||| || || | || || | | || || || || || ||| || || | ||
Sbjct 36954 GTATCCCCAAGATCCAGAAGCTCGTCTCCGACTTCTTCAA---CAAGGATGCCAACAAG- 36899
Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329
|| || || || ||||| || ||||| || ||||| || || ||||| |||| | ||
Sbjct 36898 TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCTATCCTGTCC 36839
Query 350330 GGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386
|| | || ||| || | | || | | || || ||||| | || |||||
Sbjct 36838 GGTGACCAGTCTTCCAAGTCTACCAACGAGATCCTGCTTCTCGATGTTGCCCCTCTTTCC 36779
Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446
|| || | || || | |||| || |||||| | | ||| | || | ||| |
Sbjct 36778 CTCGGTATTGAGACCGCCGGTGGTGTCATGACTCCTTTGATTAAGCGCAACACCACTATT 36719
Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506
|| || || |||||| | || || || || | | ||||| ||||| | || ||
Sbjct 36718 CCCACCAAGAAGTCCGAGACCTTCTCCACCTACTCTGATAACCAGCCCGGTGTCCTGATC 36659
Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566
|| || || || ||||| ||||| ||||| || || || || || ||| | ||
Sbjct 36658 CAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTCCTCGGAAAGTTCGAA 36599
Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626
|| | || ||||| || || | || ||||| ||| |||| ||| | |||||| ||
Sbjct 36598 CTTACTGGCATTCCCCCTGCCCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTCGATGTT 36539
Query 350627 GATTCAAATGGTAT 350640
||| | || |||||
Sbjct 36538 GATGCCAACGGTAT 36525
Score = 190 bits (210), Expect = 6e-43
Identities = 183/235 (78%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||||| | || ||||| || || || || || || || || || |
Sbjct 270964 TTTGCATACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGT 271023
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || | ||| || ||||| ||||| || ||||| |||||||| ||||||||||| |
Sbjct 271024 AATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGT 271083
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||| ||||| || || ||||| ||||| || | || |||||||| || | ||| ||||
Sbjct 271084 CAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATG 271143
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||||||||| | ||||| ||||| ||||| || || |||||||||||
Sbjct 271144 ACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 271198
Score = 120 bits (132), Expect = 9e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || ||||| |||||||| || || ||||| ||
Sbjct 271196 CATACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTC 271255
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || || || || || || || || |||||||| | ||| ||||| |||||
Sbjct 271256 AGACAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGG 271315
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || || ||||| || || | || || || || || | ||| | ||
Sbjct 271316 GGGAATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTC 271375
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
||| ||||| |||| ||||||||||| || || || ||
Sbjct 271376 AACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGAC 271414
Score = 107 bits (118), Expect = 6e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | | || || || ||||| ||| || || || || || || ||
Sbjct 270744 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 270803
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || || ||||| || || || || ||||| ||||| ||||| ||||| |||||||||
Sbjct 270804 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 270863
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || || |||||||| || ||| || || || || || | || || || ||
Sbjct 270864 ATACCCTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCAC 270922
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| | ||||||||||| | || || ||||| || |||||
Sbjct 270923 CTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970
>seq56
Length=172390
Score = 105 bits (116), Expect = 2e-17
Identities = 101/129 (78%), Gaps = 3/129 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| || |||||| | || || ||| ||||||| |||||||||||||||||||| ||
Sbjct 86385 CGGGGAACACCAAGCGTGACGTTC---TTAGATGACACACCAGCAAAGTGGAAAGTGTTC 86441
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||| || | |||||||| || ||||| || |||| |||||| ||||||||
Sbjct 86442 AGTGTCATTTGCGTCGCAGGCTCACCGATAGACTGAGCGGCAAGAACGCCGACCATTTCA 86501
Query 377578 CCAGGATTG 377586
||||| |||
Sbjct 86502 CCAGGGTTG 86510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515246090723684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |