Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq198 277 2e-69 seq12 181 1e-40 seq15 123 3e-23 seq43 89.7 6e-13 >seq198 Length=8267 Score = 277 bits (306), Expect = 2e-69 Identities = 808/1229 (66%), Gaps = 29/1229 (2%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| ||||| |||||||| ||| | ||||| || | | | ||||| || | Sbjct 5719 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGG 5660 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 | ||| | ||||||| | ||| || | | | ||| |||| || ||| ||| | Sbjct 5659 GACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGA 5600 Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 ||| |||| | | |||| || |||||||| || | || || || Sbjct 5599 AGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGCAGAGCCAGGA 5540 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778 | | ||||| || || | || |||| ||||| |||||||| || ||| | || | Sbjct 5539 AAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTT-GCTCTTC 5481 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 | ||||| |||| ||||| |||| |||| |||| |||||| ||| | | | Sbjct 5480 TTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGA 5421 Query 80839 ACCCGTGTAACATCATGAAGTTT-CTGAAAGTCGAATTGGTTCCCCT----TC-ACAAAT 80892 ||| | || || || || || | |||| | | | || | || ||| | Sbjct 5420 ACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGAGTCGACATAG 5361 Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAAAC 80949 | || ||| || || ||||| ||||| || |||||||| |||| || ||||| | Sbjct 5360 GTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCA-CTGTA--C 5304 Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 |||| || || ||||||| ||||| ||| ||||||||||| |||||||| | Sbjct 5303 TCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTC 5244 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||||||||| ||||||||| |||| | ||| |||| ||||| ||| | || | Sbjct 5243 TTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCG 5184 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129 || ||||||| ||| | || | ||||||| ||||||| ||| || | | Sbjct 5183 AGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCG 5124 Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 ||||||||||| | ||||||| |||||| | |||| ||| | ||| ||| Sbjct 5123 TACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCA 5064 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 || ||||| | || |||||| || | ||| || ||||||||| || ||| Sbjct 5063 TTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGG 5004 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGC 81307 |||| || ||| ||| ||||| || |||||| ||||||| | ||| || || || Sbjct 5003 GTCCACAGAGCGTAGAAAAGGTCACG--AGCGCGAACCTCCTCCTTACCGTGATTCTTGC 4946 Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367 ||| ||||| || || | || || || ||||| |||||||| || | ||| | | | Sbjct 4945 GCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCAC 4886 Query 81368 CCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACA 81424 | ||| | |||||||||| || ||||| || || |||||| ||||||| || Sbjct 4885 CGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCA 4826 Query 81425 TAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA 81484 |||| | ||||| | || ||||| || || | || || || | ||||| | Sbjct 4825 TAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAA 4766 Query 81485 --CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTT 81542 | || |||| |||||||| ||||| | ||| || ||| ||||| || Sbjct 4765 TGCGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTT 4708 Query 81543 CATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGA 81602 | || |||||||| ||||| ||||| ||| ||| ||||| || ||| || || Sbjct 4707 GAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGC 4648 Query 81603 CATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAA 81660 | || ||| || ||| ||||||||||||| || |||| |||||| |||| || Sbjct 4647 GAGCT--GGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTAC 4590 Query 81661 CGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCG 81720 | ||||||| || || || || || | ||| || || |||||||| ||| Sbjct 4589 TTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCG 4530 Query 81721 ATAGCTACACGCATAAACATGTACTGGGG 81749 | ||| |||||||| | || || ||| || Sbjct 4529 ACAGCAACACGCATCAGCAAGTGCTGAGG 4501 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| ||||| | ||| ||||||||||| | |||||| Sbjct 6227 GTACGCAGGTAGTACATGCCGGTCTTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTG 6168 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 | ||||| | | ||||| | || || | |||||| || ||||| |||||| |||| Sbjct 6167 GTCAGCTTGCCCATGGTGGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG 6108 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || || ||||| || ||||| Sbjct 6107 AAGGCACCGCGATCGGCGGCCAT 6085 >seq12 Length=470192 Score = 181 bits (200), Expect = 1e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| ||||| |||||||||||||| | |||| ||| | Sbjct 271414 GTCAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCGAC 271355 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || ||||| | || || |||||||||||||| ||||| || |||||||||||| | || Sbjct 271354 AACGTGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATC 271295 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 ||||| || ||||| || ||||| | ||||||||| | |||||||| |||| || || Sbjct 271294 TTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAAGAG 271235 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| || | ||| | ||||| || ||||| Sbjct 271234 TCCACTCTACACTTGGTCCTCCGTCTCCGTGGTGG 271200 Score = 179 bits (198), Expect = 4e-40 Identities = 180/232 (78%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | ||||| |||||||| || || ||||| ||| || | Sbjct 270970 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAG--AGCT 270913 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || | ||| || ||||||||||||||||| |||||||| |||| Sbjct 270912 CAGACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACC 270853 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| || ||||||| ||||| || | ||||| | Sbjct 270852 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACA 270793 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | |||| ||||| |||||| || || || |||||||| || ||||| || Sbjct 270792 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGCCA 270741 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct 271198 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 271139 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||| | || ||||| || |||||||| ||||| || |||||| Sbjct 271138 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 271079 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||| || ||||| || ||||||| ||| || || | || || || Sbjct 271078 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 271019 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || ||| | ||||| || ||||| Sbjct 271018 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGTCTACGTGGTGG 270972 Score = 163 bits (180), Expect = 3e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||||||||| | |||| ||| | ||| | ||| | Sbjct 271688 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 271629 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| ||||| || |||||||||||| | || ||||| || ||| Sbjct 271628 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAAG 271569 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||| || || | |||||||| |||| ||||| |||||||| ||| Sbjct 271568 CAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCCAT 271509 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || || || Sbjct 271508 CTGGTCCTTCGCCTCCGTGGCGG 271486 >seq15 Length=439316 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 139801 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 139742 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| ||||| || ||||| |||||||| Sbjct 139741 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 139682 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 139681 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 139623 Query 27594 GG 27595 || Sbjct 139622 GG 139621 >seq43 Length=200701 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || ||||| || ||| | || || ||||||||||| |||||| Sbjct 25385 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 25444 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | || || || |||| ||||| || || ||||| || || | Sbjct 25445 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 25504 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 25505 CGCCTGCGTGGTGG 25518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307348839360