Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq198 277 2e-69
seq12 181 1e-40
seq15 123 3e-23
seq43 89.7 6e-13
>seq198
Length=8267
Score = 277 bits (306), Expect = 2e-69
Identities = 808/1229 (66%), Gaps = 29/1229 (2%)
Strand=Plus/Minus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599
|||||||||||| ||||| |||||||| ||| | ||||| || | | | ||||| || |
Sbjct 5719 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGG 5660
Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659
| ||| | ||||||| | ||| || | | | ||| |||| || ||| ||| |
Sbjct 5659 GACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGA 5600
Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719
||| |||| | | |||| || |||||||| || | || || ||
Sbjct 5599 AGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGCAGAGCCAGGA 5540
Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778
| | ||||| || || | || |||| ||||| |||||||| || ||| | || |
Sbjct 5539 AAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTT-GCTCTTC 5481
Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838
| ||||| |||| ||||| |||| |||| |||| |||||| ||| | | |
Sbjct 5480 TTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGA 5421
Query 80839 ACCCGTGTAACATCATGAAGTTT-CTGAAAGTCGAATTGGTTCCCCT----TC-ACAAAT 80892
||| | || || || || || | |||| | | | || | || ||| |
Sbjct 5420 ACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGAGTCGACATAG 5361
Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAAAC 80949
| || ||| || || ||||| ||||| || |||||||| |||| || ||||| |
Sbjct 5360 GTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCA-CTGTA--C 5304
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|||| || || ||||||| ||||| ||| ||||||||||| |||||||| |
Sbjct 5303 TCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTC 5244
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||||||||| ||||||||| |||| | ||| |||| ||||| ||| | || |
Sbjct 5243 TTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCG 5184
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
|| ||||||| ||| | || | ||||||| ||||||| ||| || | |
Sbjct 5183 AGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCG 5124
Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
||||||||||| | ||||||| |||||| | |||| ||| | ||| |||
Sbjct 5123 TACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCA 5064
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249
|| ||||| | || |||||| || | ||| || ||||||||| || |||
Sbjct 5063 TTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGG 5004
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGC 81307
|||| || ||| ||| ||||| || |||||| ||||||| | ||| || || ||
Sbjct 5003 GTCCACAGAGCGTAGAAAAGGTCACG--AGCGCGAACCTCCTCCTTACCGTGATTCTTGC 4946
Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367
||| ||||| || || | || || || ||||| |||||||| || | ||| | | |
Sbjct 4945 GCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCAC 4886
Query 81368 CCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACA 81424
| ||| | |||||||||| || ||||| || || |||||| ||||||| ||
Sbjct 4885 CGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCA 4826
Query 81425 TAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA 81484
|||| | ||||| | || ||||| || || | || || || | ||||| |
Sbjct 4825 TAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAA 4766
Query 81485 --CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTT 81542
| || |||| |||||||| ||||| | ||| || ||| ||||| ||
Sbjct 4765 TGCGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTT 4708
Query 81543 CATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGA 81602
| || |||||||| ||||| ||||| ||| ||| ||||| || ||| || ||
Sbjct 4707 GAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGC 4648
Query 81603 CATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAA 81660
| || ||| || ||| ||||||||||||| || |||| |||||| |||| ||
Sbjct 4647 GAGCT--GGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTAC 4590
Query 81661 CGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCG 81720
| ||||||| || || || || || | ||| || || |||||||| |||
Sbjct 4589 TTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCG 4530
Query 81721 ATAGCTACACGCATAAACATGTACTGGGG 81749
| ||| |||||||| | || || ||| ||
Sbjct 4529 ACAGCAACACGCATCAGCAAGTGCTGAGG 4501
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||||||||| ||||| | ||| ||||||||||| | ||||||
Sbjct 6227 GTACGCAGGTAGTACATGCCGGTCTTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTG 6168
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
| ||||| | | ||||| | || || | |||||| || ||||| |||||| ||||
Sbjct 6167 GTCAGCTTGCCCATGGTGGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG 6108
Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180
|| || || ||||| || |||||
Sbjct 6107 AAGGCACCGCGATCGGCGGCCAT 6085
>seq12
Length=470192
Score = 181 bits (200), Expect = 1e-40
Identities = 169/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || ||||| ||||| ||||| |||||||||||||| | |||| ||| |
Sbjct 271414 GTCAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCGAC 271355
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| ||||| | || || |||||||||||||| ||||| || |||||||||||| | ||
Sbjct 271354 AACGTGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATC 271295
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
||||| || ||||| || ||||| | ||||||||| | |||||||| |||| || ||
Sbjct 271294 TTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAAGAG 271235
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| || | ||| | ||||| || |||||
Sbjct 271234 TCCACTCTACACTTGGTCCTCCGTCTCCGTGGTGG 271200
Score = 179 bits (198), Expect = 4e-40
Identities = 180/232 (78%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| | ||||| |||||||| || || ||||| ||| || |
Sbjct 270970 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAG--AGCT 270913
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | || | ||| || ||||||||||||||||| |||||||| ||||
Sbjct 270912 CAGACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACC 270853
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||||| || || ||||||||||| || ||||||| ||||| || | ||||| |
Sbjct 270852 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACA 270793
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| |||| ||||| |||||| || || || |||||||| || ||||| ||
Sbjct 270792 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGCCA 270741
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || |||||||||||||| || ||||| || ||||||
Sbjct 271198 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 271139
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| ||||| | || ||||| || |||||||| ||||| || ||||||
Sbjct 271138 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 271079
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || ||||| || ||||| || ||||||| ||| || || | || || ||
Sbjct 271078 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 271019
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || || || ||| | ||||| || |||||
Sbjct 271018 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGTCTACGTGGTGG 270972
Score = 163 bits (180), Expect = 3e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || |||||||||||||| | |||| ||| | ||| | ||| |
Sbjct 271688 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 271629
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| ||||| || |||||||||||| | || ||||| || |||
Sbjct 271628 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAAG 271569
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||| | ||| || || | |||||||| |||| ||||| |||||||| |||
Sbjct 271568 CAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCCAT 271509
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || || ||
Sbjct 271508 CTGGTCCTTCGCCTCCGTGGCGG 271486
>seq15
Length=439316
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || || || ||||| | || | |||
Sbjct 139801 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 139742
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||| ||||||||
Sbjct 139741 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 139682
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||||| || ||||| ||| ||||| || |||| ||
Sbjct 139681 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 139623
Query 27594 GG 27595
||
Sbjct 139622 GG 139621
>seq43
Length=200701
Score = 89.7 bits (98), Expect = 6e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| ||||| || ||||| || ||| | || || ||||||||||| ||||||
Sbjct 25385 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 25444
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || || || | || || || |||| ||||| || || ||||| || || |
Sbjct 25445 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 25504
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 25505 CGCCTGCGTGGTGG 25518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307348839360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |