Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 9e-21
>seq12
Length=470192
Score = 116 bits (128), Expect = 9e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || || || || || || |||||||||||||||| | || | |||||
Sbjct 270986 GAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATC 271045
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| ||||| ||||| || | |||||||| | | || || |||||
Sbjct 271046 CTCAAGCTGCTTT--CCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTA 271103
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|||||||| || || ||| | || | | || || ||| |||||||| || |||
Sbjct 271104 TCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATA 271163
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| ||||| ||||| ||||| | ||||||
Sbjct 271164 GTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 271198
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || || ||||| ||| || ||||||||||| || | | ||| | ||||| ||
Sbjct 270762 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCC 270821
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || ||||||||||| | ||||||||| | | || || ||||| || |||
Sbjct 270822 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 270881
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | | ||||||| ||||| || || || || ||||| ||
Sbjct 270882 ATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTT 270941
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | |||||| || |||| |||||
Sbjct 270942 CCGGTCAAAGTCTTGACAAAGATTTGCAT 270970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153814472735188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |