Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq12 178 3e-39
seq15 152 1e-31
seq43 123 5e-23
seq67 91.5 3e-13
>seq12
Length=470192
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || ||||||||||| || |
Sbjct 270971 ACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGA 271030
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| || || || ||||||||||| | |||||| |||||| ||
Sbjct 271031 AAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGG 271090
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||| ||||| | || || |||||||||| || || | |||||
Sbjct 271091 AATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGAC 271150
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 271151 TTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 271198
Score = 174 bits (192), Expect = 3e-38
Identities = 179/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || | ||||| || | ||||| || || |||||||||||||| | |
Sbjct 270744 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 270803
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| || || || || || ||||| | ||| || |||||| |||
Sbjct 270804 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 270863
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|||||||||||||| || ||| ||||| || ||| | ||||| ||||| | |||| || |
Sbjct 270864 ATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCTG-AGCTCTCCA 270921
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || ||||| ||||| || ||||||||||| || || || |||||
Sbjct 270922 CCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| |||| ||| ||||| |||||||| |||||||
Sbjct 271199 ACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGA 271258
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || ||||||||||||||||| || |||||| ||
Sbjct 271259 CAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGG 271318
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||||| || ||| | ||||| || || || || ||
Sbjct 271319 AATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAAC 271378
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| || || || ||||| || |||| ||||| ||||
Sbjct 271379 CTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 271416
Score = 138 bits (152), Expect = 2e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| |||||||| |||||||| | ||| || || |||||||| ||||| |
Sbjct 271485 ACCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGA 271544
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || ||||||||||||||||| || ||||| ||
Sbjct 271545 CAGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGG 271604
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||||| || || | ||||| || || | || ||
Sbjct 271605 AATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAAC 271664
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 271665 CTCAAGGGTGATGGTCTTGCCAGT 271688
>seq15
Length=439316
Score = 152 bits (168), Expect = 1e-31
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 139623 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 139682
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| ||||||||| ||||| ||||||||||| |||||||| | || ||| | |||
Sbjct 139683 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 139742
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 139743 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 139801
>seq43
Length=200701
Score = 123 bits (136), Expect = 5e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || ||||||||||| || |
Sbjct 25519 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 25460
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || || || ||||||||||||||||||||| ||
Sbjct 25459 AAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGG 25400
Query 282992 AATACCCTCCTTGTCT 283007
||||||||||||||||
Sbjct 25399 AATACCCTCCTTGTCT 25384
>seq67
Length=141994
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| ||| | || | |||||||| || | || |||
Sbjct 89848 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 89789
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| | || || || ||||| ||||| || | | ||||| || || || |||| |
Sbjct 89788 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 89729
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||| | | |||||||||| || |||||| ||| || | || || || ||||
Sbjct 89728 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACT 89669
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||||||||||||| | || || || | | | |||||
Sbjct 89668 TCTTCGAAAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 89629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046733459943912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |