Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
>seq2
Length=5360957
Score = 95.1 bits (104), Expect = 1e-14
Identities = 196/289 (68%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || ||||||||||| || ||| |||| ||||| ||||||||||| |||||
Sbjct 1779073 ATGTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGG 1779014
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| ||||| || | || ||||| || | ||| || || | ||
Sbjct 1779013 AAGCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGG 1778954
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA- 17412
|| ||||| || || |||||| |||||||| || || | | || | ||| ||
Sbjct 1778953 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAA 1778894
Query 17413 --TTTTTCGTCCGGTGTAA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTT 17468
| ||||| || || | | ||||||| | | ||| ||||| | ||| | |
Sbjct 1778893 CGCTCATCGTC--GTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCT 1778836
Query 17469 CTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| |||| |||||| ||| |||| | ||||| || ||||| | ||| ||
Sbjct 1778835 CCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 1778787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545496490880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |