Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 159 4e-34 seq2 107 2e-18 >seq1 Length=8587311 Score = 159 bits (176), Expect = 4e-34 Identities = 728/1143 (64%), Gaps = 16/1143 (1%) Strand=Plus/Minus Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769 ||| ||||| || ||||| || ||||||| || || | || ||||||||||| Sbjct 4411426 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAGTGCA 4411367 Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829 || ||| | || || || | || | || |||||||| ||||| || ||||| Sbjct 4411366 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 4411307 Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889 ||| || || ||||| || ||||||| ||| |||||| || | ||| || | ||||| Sbjct 4411306 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAG 4411247 Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACA 53945 ||||||| || | || | | ||| | ||||| | | ||| | | Sbjct 4411246 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGA 4411189 Query 53946 ATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 54005 | || ||||| || || | |||| | | ||||| |||| || || | | Sbjct 4411188 GCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAGA 4411131 Query 54006 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 54064 || ||| || |||| ||| || || ||||| |||||||| || |||| ||||| | Sbjct 4411130 GCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCGT 4411071 Query 54065 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 54124 | ||| || || | | | | ||||| || || |||||| |||||||||||| Sbjct 4411070 AGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAAC 4411012 Query 54125 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTT 54184 | | | ||| | |||||||| |||| ||| |||| | | || || || ||||| Sbjct 4411011 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTA 4410952 Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 4410951 CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCG 4410892 Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 54302 ||||| | || ||||| || | || || || | || ||||| | |||| Sbjct 4410891 TTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTG 4410832 Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362 ||||| || || || || | || ||||| | || || || | |||||||| | Sbjct 4410831 --AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAA 4410774 Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422 | ||||| || || || | ||| || || || || || | | ||| | | Sbjct 4410773 TACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGGG 4410714 Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 54482 ||| | ||||| || | || || || ||||| || || | |||| || | | | Sbjct 4410713 GAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGT 4410654 Query 54483 TGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 54542 ||| ||||| || || || || ||| |||||||| || || |||||||| | Sbjct 4410653 GGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATCA 4410594 Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602 || ||||||||| | ||| | | ||| ||| || || | ||| || || | Sbjct 4410593 GCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCGA 4410534 Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662 || ||||| || || |||||||| ||||| || ||||| | |||| | ||||||| Sbjct 4410533 GGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTGA 4410474 Query 54663 GTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATCGGAGAATGT 54721 | | || || || |||| | | | | || | | ||| || || |||| | Sbjct 4410473 GCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGGC 4410415 Query 54722 TTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttt 54781 || ||||| || |||||||| | | | ||| || || ||| | ||| Sbjct 4410414 TTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTTT 4410355 Query 54782 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 54841 ||||||| ||||| || || || ||||| || | || || |||||||| || || || Sbjct 4410354 TTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGG 4410295 Query 54842 TGT 54844 ||| Sbjct 4410294 TGT 4410292 >seq2 Length=5360957 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || ||| || || || ||| |||||||| || | || || |||||||| Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| || Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || || ||||||| Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 1779255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721481255680