Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 4e-34
seq2 107 2e-18
>seq1
Length=8587311
Score = 159 bits (176), Expect = 4e-34
Identities = 728/1143 (64%), Gaps = 16/1143 (1%)
Strand=Plus/Minus
Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769
||| ||||| || ||||| || ||||||| || || | || |||||||||||
Sbjct 4411426 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAGTGCA 4411367
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
|| ||| | || || || | || | || |||||||| ||||| || |||||
Sbjct 4411366 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 4411307
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||| || || ||||| || ||||||| ||| |||||| || | ||| || | |||||
Sbjct 4411306 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAG 4411247
Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACA 53945
||||||| || | || | | ||| | ||||| | | ||| | |
Sbjct 4411246 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGA 4411189
Query 53946 ATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 54005
| || ||||| || || | |||| | | ||||| |||| || || | |
Sbjct 4411188 GCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAGA 4411131
Query 54006 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 54064
|| ||| || |||| ||| || || ||||| |||||||| || |||| ||||| |
Sbjct 4411130 GCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCGT 4411071
Query 54065 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 54124
| ||| || || | | | | ||||| || || |||||| ||||||||||||
Sbjct 4411070 AGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAAC 4411012
Query 54125 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTT 54184
| | | ||| | |||||||| |||| ||| |||| | | || || || |||||
Sbjct 4411011 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTA 4410952
Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 4410951 CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCG 4410892
Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 54302
||||| | || ||||| || | || || || | || ||||| | ||||
Sbjct 4410891 TTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTG 4410832
Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362
||||| || || || || | || ||||| | || || || | |||||||| |
Sbjct 4410831 --AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAA 4410774
Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422
| ||||| || || || | ||| || || || || || | | ||| | |
Sbjct 4410773 TACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGGG 4410714
Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 54482
||| | ||||| || | || || || ||||| || || | |||| || | | |
Sbjct 4410713 GAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGT 4410654
Query 54483 TGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 54542
||| ||||| || || || || ||| |||||||| || || |||||||| |
Sbjct 4410653 GGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATCA 4410594
Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602
|| ||||||||| | ||| | | ||| ||| || || | ||| || || |
Sbjct 4410593 GCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCGA 4410534
Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662
|| ||||| || || |||||||| ||||| || ||||| | |||| | |||||||
Sbjct 4410533 GGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTGA 4410474
Query 54663 GTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATCGGAGAATGT 54721
| | || || || |||| | | | | || | | ||| || || |||| |
Sbjct 4410473 GCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGGC 4410415
Query 54722 TTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttt 54781
|| ||||| || |||||||| | | | ||| || || ||| | |||
Sbjct 4410414 TTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTTT 4410355
Query 54782 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 54841
||||||| ||||| || || || ||||| || | || || |||||||| || || ||
Sbjct 4410354 TTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGG 4410295
Query 54842 TGT 54844
|||
Sbjct 4410294 TGT 4410292
>seq2
Length=5360957
Score = 107 bits (118), Expect = 2e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| || ||| || || || ||| |||||||| || | || || ||||||||
Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| ||
Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279
|| ||||| || || || || || || |||||||
Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 1779255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721481255680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |