Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3 122 7e-23 >seq3 Length=5002383 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||||||| || || ||||||||||| | | Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| ||||| ||| | || | | ||||||||| ||| Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| ||||| | | ||| ||||| | | ||| Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACC 15856 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 || | |||||||||||| ||||| | || ||||| Sbjct 15857 TCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGAC 15891 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | |||||||||||| || ||||||||||| | ||| || | ||||| Sbjct 15978 AGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCC 16037 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| | || | | |||||||||| ||| | ||| |||||||| Sbjct 16038 TCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16097 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | | ||| ||||| | || ||| || | ||| |||||| Sbjct 16098 TGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 16157 Query 21144 TTGCCGGT 21151 ||||| || Sbjct 16158 TTGCCAGT 16165 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| |||| |||| |||||| || ||||| ||||||| Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| || || || | ||||| | ||||||||| || Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | ||| || || | |||| Sbjct 15341 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 15400 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| ||||| || || |||||||| |||||||| Sbjct 15401 TCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259117659456