Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 201 1e-46 seq1 123 3e-23 seq3 118 1e-21 >seq2 Length=5360957 Score = 201 bits (222), Expect = 1e-46 Identities = 216/285 (76%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||||| | || || Sbjct 1778787 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATCTT 1778846 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | |||||||||||| | ||||| | ||| || Sbjct 1778847 TCCAAGGATCTTCACGACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTCGTCTCC 1778906 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| ||||||||| |||||| || ||||||||||| || || ||||| Sbjct 1778907 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTTGAGCGC 1778966 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||| | ||||||| || |||||||||||||| |||||| ||| Sbjct 1778967 TTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 1779026 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| |||| || || |||||||| || ||| Sbjct 1779027 GAGAACATCCACTCTGAAACCTACTCTCTGCTCATCGATACCTAC 1779071 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || ||| | ||||| ||||| | |||| ||| || || ||||| || Sbjct 1552068 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 1552127 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| || || |||||||||||||||||| | || || || || ||| | Sbjct 1552128 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 1552187 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 1552188 CGCCTGCGTGGTGGTGG 1552204 >seq1 Length=8587311 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 959390 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 959449 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| | ||||| || || || Sbjct 959450 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 959508 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| | |||||||||||||||||| Sbjct 959509 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 959568 Query 40878 GG 40879 || Sbjct 959569 GG 959570 >seq3 Length=5002383 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||||||| | || || || ||| ||| | | | | | ||||| Sbjct 16167 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGT 16108 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 ||| || | ||||| |||||||| ||| |||||||||| || | |||| || || | Sbjct 16107 CAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAA 16048 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| ||||| || |||||| ||||||||||||||| |||| || | Sbjct 16047 AGCAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCC 15988 Query 40892 ATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| || | ||| | | ||||| Sbjct 15987 ATCTGGTCCTTCGCCTCCGTGGCGG 15963 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || || || ||||| | || || || | | Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 15388 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 15387 GACACCATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 15329 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| || | || || || |||||||| Sbjct 15328 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACAA 15269 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| ||| ||||| || |||||||| || | || ||| Sbjct 15268 CATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGC 15220 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| | || ||||| | || Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||| || |||| || || |||||||| ||| | |||||| Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || || || ||||| || || | ||||| || ||| |||||| Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 15496 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 15495 ATCCAGAAGGAATCCACACTCCACCTTGT 15467 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || ||||| ||| | || || || | | ||| | | | Sbjct 15893 TCGTCAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCG 15834 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| | ||| ||| || | ||||| |||||||| ||| | |||||||| || | Sbjct 15833 ACAACG-TGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTG 15775 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| |||||||| |||| || ||||| ||||| ||||||||||| Sbjct 15774 ATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAA 15715 Query 40879 GAGGCCACGCTGCA 40892 ||| |||| || || Sbjct 15714 GAGTCCACTCTACA 15701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219096956160