Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 201 1e-46
seq1 123 3e-23
seq3 118 1e-21
>seq2
Length=5360957
Score = 201 bits (222), Expect = 1e-46
Identities = 216/285 (76%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | || ||
Sbjct 1778787 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATCTT 1778846
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | |||||||||||| | ||||| | ||| ||
Sbjct 1778847 TCCAAGGATCTTCACGACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTCGTCTCC 1778906
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || ||||| ||||||||| |||||| || ||||||||||| || || |||||
Sbjct 1778907 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTTGAGCGC 1778966
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | ||||||| || |||||||||||||| |||||| |||
Sbjct 1778967 TTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 1779026
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | ||||| |||| || || |||||||| || |||
Sbjct 1779027 GAGAACATCCACTCTGAAACCTACTCTCTGCTCATCGATACCTAC 1779071
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| || ||| | ||||| ||||| | |||| ||| || || ||||| ||
Sbjct 1552068 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 1552127
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||| || || |||||||||||||||||| | || || || || ||| |
Sbjct 1552128 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 1552187
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 1552188 CGCCTGCGTGGTGGTGG 1552204
>seq1
Length=8587311
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | |
Sbjct 959390 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 959449
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| | ||||| || || ||
Sbjct 959450 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 959508
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | |||||||| | ||||||||||||||||||
Sbjct 959509 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 959568
Query 40878 GG 40879
||
Sbjct 959569 GG 959570
>seq3
Length=5002383
Score = 118 bits (130), Expect = 1e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| ||||| ||||||||| | || || || ||| ||| | | | | | |||||
Sbjct 16167 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGT 16108
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
||| || | ||||| |||||||| ||| |||||||||| || | |||| || || |
Sbjct 16107 CAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAA 16048
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || |||| ||||| || |||||| ||||||||||||||| |||| || |
Sbjct 16047 AGCAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCC 15988
Query 40892 ATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||| || | ||| | | |||||
Sbjct 15987 ATCTGGTCCTTCGCCTCCGTGGCGG 15963
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || || || ||||| | || || || | |
Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 15388
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| ||||| || || | |||||
Sbjct 15387 GACACCATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 15329
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || |||||||| || | || || || ||||||||
Sbjct 15328 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACAA 15269
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| ||| ||||| || |||||||| || | || |||
Sbjct 15268 CATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGC 15220
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| || ||||| | || ||||| | ||
Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | ||| || |||| || || |||||||| ||| | ||||||
Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||||| || || || ||||| || || | ||||| || ||| ||||||
Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 15496
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| |||| || || || ||
Sbjct 15495 ATCCAGAAGGAATCCACACTCCACCTTGT 15467
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || || || ||||| ||| | || || || | | ||| | | |
Sbjct 15893 TCGTCAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCG 15834
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| | ||| ||| || | ||||| |||||||| ||| | |||||||| || |
Sbjct 15833 ACAACG-TGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTG 15775
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || ||||| |||||||| |||| || ||||| ||||| |||||||||||
Sbjct 15774 ATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAA 15715
Query 40879 GAGGCCACGCTGCA 40892
||| |||| || ||
Sbjct 15714 GAGTCCACTCTACA 15701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219096956160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |