Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq1 107 2e-18 >seq3 Length=5002383 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||| ||| | || ||| || || |||||||| || | ||| || ||| Sbjct 15235 CAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATC 15294 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || |||||| |||| ||||||||||| || ||||| || ||||||||||| Sbjct 15295 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 15354 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| || || || | |||| |||||| | |||||| ||||| | || | || Sbjct 15355 CTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGT 15414 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||||| ||| || ||||| || ||||| Sbjct 15415 CTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| || || || || |||||||||||| | ||||| |||||| ||||| Sbjct 15472 GTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTG 15531 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||||| || |||||||||| ||||| || || || ||||||||||| ||| ||| || Sbjct 15532 CTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTT 15591 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || || | |||||| || | || | || |||||||| Sbjct 15592 GGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGT 15651 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 15652 GAGTGTCTTGACGAAAATCTGCAT 15675 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| |||| || ||||| || || ||||| || ||| || ||||| |||||| Sbjct 15981 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 16040 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| || |||| | ||||||||| || || || |||||||||||||| Sbjct 16041 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 16100 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | |||| ||| || || ||| ||||| | ||| | || ||| Sbjct 16101 ATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 16160 Query 118710 CCGGT 118714 || || Sbjct 16161 CCAGT 16165 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || |||||||| || ||||| || || || || || ||||| Sbjct 15695 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCC 15754 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| | ||||||||| || || || |||||||||||||| Sbjct 15755 AGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGG 15814 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | |||| ||| || | ||| ||||| | ||| | || || Sbjct 15815 ATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTT 15874 Query 118710 CCGGTCAGAGTTTTTAC 118726 |||||||| || || || Sbjct 15875 CCGGTCAGGGTCTTGAC 15891 >seq1 Length=8587311 Score = 107 bits (118), Expect = 2e-18 Identities = 135/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| || || ||| |||| Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 |||||||| || || || || ||||||||||||| ||| | | || || || || | | Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 959451 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 959450 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 959391 Query 118729 AA 118730 || Sbjct 959390 AA 959389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830315403072