Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 1e-19
seq1 93.3 9e-14
>seq4
Length=4347949
Score = 113 bits (124), Expect = 1e-19
Identities = 134/180 (74%), Gaps = 4/180 (2%)
Strand=Plus/Plus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
||||| || |||||| || | ||||| |||||||| |||| ||||||| ||||| |||
Sbjct 351473 TGTCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 351532
Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319
||||| | ||||| ||||||||||| || || | | || ||||| || || || |
Sbjct 351533 TCCGCTTTGCGCCGCACGATGGAGACATACAGTCGG--ATCACACGTTTCTGTCTTGTCT 351590
Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||||||| || ||||||| ||||| || ||| ||| |||||| || ||||
Sbjct 351591 GCAACTACGTCACGCGCATCATCGAGCCGCTCGCCAGTCGTTGCAGCAAGTTCCGGTTCA 351650
>seq1
Length=8587311
Score = 93.3 bits (102), Expect = 9e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 4410971 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAG 4411030
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
|| |||| || ||| | | || |||||||| ||||||| |||||| | ||||
Sbjct 4411031 AATCACGGTAAGGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTGTGGACCCCCGAT 4411090
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
| |||||| |||||| ||||| |||| || ||||||||
Sbjct 4411091 CTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGACGCT 4411131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766179877888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |