Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 113 1e-19 seq1 93.3 9e-14 >seq4 Length=4347949 Score = 113 bits (124), Expect = 1e-19 Identities = 134/180 (74%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 ||||| || |||||| || | ||||| |||||||| |||| ||||||| ||||| ||| Sbjct 351473 TGTCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 351532 Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319 ||||| | ||||| ||||||||||| || || | | || ||||| || || || | Sbjct 351533 TCCGCTTTGCGCCGCACGATGGAGACATACAGTCGG--ATCACACGTTTCTGTCTTGTCT 351590 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||||| || ||||||| ||||| || ||| ||| |||||| || |||| Sbjct 351591 GCAACTACGTCACGCGCATCATCGAGCCGCTCGCCAGTCGTTGCAGCAAGTTCCGGTTCA 351650 >seq1 Length=8587311 Score = 93.3 bits (102), Expect = 9e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| ||||||||||||| | || |||||||| || || ||| Sbjct 4410971 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAG 4411030 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 || |||| || ||| | | || |||||||| ||||||| |||||| | |||| Sbjct 4411031 AATCACGGTAAGGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTGTGGACCCCCGAT 4411090 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | |||||| |||||| ||||| |||| || |||||||| Sbjct 4411091 CTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGACGCT 4411131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766179877888