Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 315 6e-81 seq2 123 2e-23 seq3 86.0 6e-12 >seq1 Length=8587311 Score = 315 bits (348), Expect = 6e-81 Identities = 1209/1883 (64%), Gaps = 30/1883 (2%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || || ||||| |||| | | ||| | |||| || || || |||||||| ||| Sbjct 4412343 TCAACGGTGAACTGGATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 4412284 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 |||| |||||||||||| || || || || |||| || || | ||| Sbjct 4412283 TTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTGGTCAGCTTGCCCATGGTGGGCTCC 4412224 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || || | |||| ||||| ||||||||| || || || |||||||||||||| Sbjct 4412223 TTCAAGTGGATGTTGAGGGACTGCGACTGATCGATGAAGGCACCGCGATCGGCGGCCATC 4412164 Query 22289 TTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAA 22347 | || ||||| ||| || || ||||| |||||||||||||| | |||| || Sbjct 4412163 TGTAG-AATGTTGCGCTGGGAGATCTCCCAAACGGTCTTGTACAGGGCCTTGATATCGGC 4412105 Query 22348 CGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGT 22407 || || ||| |||||||||| ||| || | ||||| || || || | Sbjct 4412104 GGGGATGTTAGGGATGTTCTGGACGGAGCCGCCATCGGCGATGATACGGTTCTTCATGTT 4412045 Query 22408 ATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAA 22467 ||| ||||| |||| | || || ||| || | || | |||| || | || || Sbjct 4412044 GTCGGACCACAGGCCGAGGTCGACCAGATCCTTCAGGAGCCAAGGGTTGACGATCTGGAA 4411985 Query 22468 CTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATT 22527 ||| || | || || ||||| ||| ||||| || ||| | || ||||| | ||||| Sbjct 4411984 CTCACCAGCCAGAACACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCATT 4411925 Query 22528 GTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCT 22587 | ||||| || ||| ||| || || ||||| || || | || || ||| | Sbjct 4411924 GAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCATGGGGGCAACCAACAGACTGTTGCG 4411865 Query 22588 CAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGT 22647 | || || | ||| || ||| || | ||||||||| ||||||| || || Sbjct 4411864 GACACCAGTCTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAGATCGGTAGGGGT 4411805 Query 22648 CACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTAC 22705 ||||||||| ||||| |||| | ||| |||| || || ||| ||| Sbjct 4411804 GCG---GTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACG--GGAGAGCCAGGGTAA 4411750 Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765 || || || ||||| || ||||| ||| | || ||| || |||| || Sbjct 4411749 GTCTCATAGGGACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAG 4411690 Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825 || ||||||||||| | |||| | || ||| || ||| |||||| |||| Sbjct 4411689 ATGGTCTCGAAGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGC 4411630 Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885 | || ||| || || || | ||| | || || | | |||| || |||| | Sbjct 4411629 AGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAG 4411570 Query 22886 TTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTT 22945 || | || ||||| || | || || | || ||| || | |||||| | || Sbjct 4411569 TTGCTCTTCTTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCA-GATT 4411511 Query 22946 CTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC---CG-ATT 23000 || | | || | | | || || || |||| || | Sbjct 4411510 GTGCACGAGAACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGA 4411451 Query 23001 GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGG 23060 || | ||| | || || ||||| || || || ||||| || |||||||| || || Sbjct 4411450 GT-CGACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGG 4411392 Query 23061 ACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTATCGTGCCCAAATTGC 23117 ||||||| | ||| || || || || || ||| | || || |||| || Sbjct 4411391 TACTGTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGA---ATAGTACCCAGGTTCT 4411335 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 ||||||| || || ||||| | |||||||||||||||| | || | || ||||| Sbjct 4411334 TCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAG 4411275 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTG 23236 ||| | ||||| || || ||| | ||||||| | | ||| || | | | Sbjct 4411274 TCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGGCCACGG 4411216 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAG 23295 || || | ||||||||| ||| | || || || || ||||||| ||| || || || Sbjct 4411215 CCCTCCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACA-TCAGCTAG 4411157 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355 ||| || | | | || || | ||| |||| || || ||||| |||| Sbjct 4411156 GCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCAT 4411097 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 || ||||| || |||| ||||||||||| || || || ||||| |||||||| || || Sbjct 4411096 GAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACC 4411037 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 | ||||| || ||| | || || || || || || ||||||||||| ||||| | Sbjct 4411036 GTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGAT 4410977 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 |||||| || || || | ||| || || ||||| || || ||||| || |||||||| | Sbjct 4410976 GGCAAAGGCACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAA 4410917 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACC 23595 ||| | ||||| || || | ||||||||| | |||| || || | ||||| Sbjct 4410916 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACC 4410857 Query 23596 TTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGC 23655 | || |||| | ||| || | || ||| || || || | | || || ||||| || Sbjct 4410856 GGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGC 4410797 Query 23656 GCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC--CTCTTTGGTCGCGACCAAG 23713 || || ||||| || || || ||||| |||||||| | || || | |||| | Sbjct 4410796 ACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGT--CAACCAGG 4410739 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 || || || | | || | || ||| |||||||| |||||| || ||| |||||| Sbjct 4410738 AAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 4410679 Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCG 23833 || ||||| | ||||| | | ||| || || ||||| ||||||||||| ||| Sbjct 4410678 GTGAAGTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCG 4410619 Query 23834 TGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTA 23893 || || |||| || || ||||||| || || ||||| | ||| | ||||||| Sbjct 4410618 TGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTA 4410559 Query 23894 ATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCA 23953 || | || ||||| || | | || |||||||| || |||| ||||| |||||| Sbjct 4410558 ATCCGAAGAAGGTATGACCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCA 4410499 Query 23954 CGATCGTGCACTATGGCCGAATT 23976 || |||| ||| || ||||| || Sbjct 4410498 CGGTCGTACACAATAGCCGAGTT 4410476 >seq2 Length=5360957 Score = 123 bits (136), Expect = 2e-23 Identities = 285/422 (68%), Gaps = 18/422 (4%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || ||| || || | || || ||| || Sbjct 1779257 GCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTG 1779316 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||||| || || || || |||||||||||| || || || ||| Sbjct 1779317 AAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTGATGAG 1779376 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 |||||||| ||||| ||||| || || ||| ||| ||||| | |||| | | Sbjct 1779377 GGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACAT----GAACCACCGCCCC-- 1779430 Query 58161 GATCGCA------TCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 || | || | ||| || || |||||| |||| ||||| | ||||| || Sbjct 1779431 GACCCCAAGGTGGTTGAGGATATCATTGTCGAGGCTGTCGGAATCGAGCAGGAGTTCCTC 1779490 Query 58215 ACCGAAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACAT 58273 || || || | | || | |||| |||| || |||||| | |||||| ||||||| Sbjct 1779491 ACTGACGCTCTTCCCTGCGGCC-TGCTTGGCATGAACGCCAAGCTGATGTGCGAGTACAT 1779549 Query 58274 TGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACG 58331 |||||| || || ||| | || || | | || | ||| || | |||||| | Sbjct 1779550 TGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT-ACTACAACGCT 1779607 Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAA 58391 | || || || || || ||| | ||||| | | |||||||| ||||| |||||| Sbjct 1779608 ACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACTTCTTCGAA 1779667 Query 58392 AA 58393 || Sbjct 1779668 AA 1779669 >seq3 Length=5002383 Score = 86.0 bits (94), Expect = 6e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAA-CA 31275 || ||||| || |||||| | || ||||| | ||| | |||| | ||||| || Sbjct 16165 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 16106 Query 31276 GAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335 ||| | ||||||||| ||| | || || |||||||||||| | || || || || || Sbjct 16105 AAGA-TCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAA 16047 Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395 ||| | || ||| | || || ||| |||||||| || || || || ||||| || Sbjct 16046 GCAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCCA 15987 Query 31396 TCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| ||| | || | ||||||| Sbjct 15986 TCTGGTCCTTCGCCTCCGTGGCGGTA 15961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766310846720