Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 315 6e-81
seq2 123 2e-23
seq3 86.0 6e-12
>seq1
Length=8587311
Score = 315 bits (348), Expect = 6e-81
Identities = 1209/1883 (64%), Gaps = 30/1883 (2%)
Strand=Plus/Minus
Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168
|| || || ||||| |||| | | ||| | |||| || || || |||||||| |||
Sbjct 4412343 TCAACGGTGAACTGGATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 4412284
Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228
|||| |||||||||||| || || || || |||| || || | |||
Sbjct 4412283 TTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTGGTCAGCTTGCCCATGGTGGGCTCC 4412224
Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288
| || || | |||| ||||| ||||||||| || || || ||||||||||||||
Sbjct 4412223 TTCAAGTGGATGTTGAGGGACTGCGACTGATCGATGAAGGCACCGCGATCGGCGGCCATC 4412164
Query 22289 TTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAA 22347
| || ||||| ||| || || ||||| |||||||||||||| | |||| ||
Sbjct 4412163 TGTAG-AATGTTGCGCTGGGAGATCTCCCAAACGGTCTTGTACAGGGCCTTGATATCGGC 4412105
Query 22348 CGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGT 22407
|| || ||| |||||||||| ||| || | ||||| || || || |
Sbjct 4412104 GGGGATGTTAGGGATGTTCTGGACGGAGCCGCCATCGGCGATGATACGGTTCTTCATGTT 4412045
Query 22408 ATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAA 22467
||| ||||| |||| | || || ||| || | || | |||| || | || ||
Sbjct 4412044 GTCGGACCACAGGCCGAGGTCGACCAGATCCTTCAGGAGCCAAGGGTTGACGATCTGGAA 4411985
Query 22468 CTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATT 22527
||| || | || || ||||| ||| ||||| || ||| | || ||||| | |||||
Sbjct 4411984 CTCACCAGCCAGAACACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCATT 4411925
Query 22528 GTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCT 22587
| ||||| || ||| ||| || || ||||| || || | || || ||| |
Sbjct 4411924 GAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCATGGGGGCAACCAACAGACTGTTGCG 4411865
Query 22588 CAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGT 22647
| || || | ||| || ||| || | ||||||||| ||||||| || ||
Sbjct 4411864 GACACCAGTCTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAGATCGGTAGGGGT 4411805
Query 22648 CACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTAC 22705
||||||||| ||||| |||| | ||| |||| || || ||| |||
Sbjct 4411804 GCG---GTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACG--GGAGAGCCAGGGTAA 4411750
Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765
|| || || ||||| || ||||| ||| | || ||| || |||| ||
Sbjct 4411749 GTCTCATAGGGACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAG 4411690
Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825
|| ||||||||||| | |||| | || ||| || ||| |||||| ||||
Sbjct 4411689 ATGGTCTCGAAGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGC 4411630
Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885
| || ||| || || || | ||| | || || | | |||| || |||| |
Sbjct 4411629 AGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAG 4411570
Query 22886 TTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTT 22945
|| | || ||||| || | || || | || ||| || | |||||| | ||
Sbjct 4411569 TTGCTCTTCTTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCA-GATT 4411511
Query 22946 CTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC---CG-ATT 23000
|| | | || | | | || || || |||| || |
Sbjct 4411510 GTGCACGAGAACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGA 4411451
Query 23001 GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGG 23060
|| | ||| | || || ||||| || || || ||||| || |||||||| || ||
Sbjct 4411450 GT-CGACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGG 4411392
Query 23061 ACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTATCGTGCCCAAATTGC 23117
||||||| | ||| || || || || || ||| | || || |||| ||
Sbjct 4411391 TACTGTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGA---ATAGTACCCAGGTTCT 4411335
Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177
||||||| || || ||||| | |||||||||||||||| | || | || |||||
Sbjct 4411334 TCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAG 4411275
Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTG 23236
||| | ||||| || || ||| | ||||||| | | ||| || | | |
Sbjct 4411274 TCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGGCCACGG 4411216
Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAG 23295
|| || | ||||||||| ||| | || || || || ||||||| ||| || || ||
Sbjct 4411215 CCCTCCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACA-TCAGCTAG 4411157
Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355
||| || | | | || || | ||| |||| || || ||||| ||||
Sbjct 4411156 GCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCAT 4411097
Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415
|| ||||| || |||| ||||||||||| || || || ||||| |||||||| || ||
Sbjct 4411096 GAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACC 4411037
Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475
| ||||| || ||| | || || || || || || ||||||||||| ||||| |
Sbjct 4411036 GTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGAT 4410977
Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535
|||||| || || || | ||| || || ||||| || || ||||| || |||||||| |
Sbjct 4410976 GGCAAAGGCACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAA 4410917
Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACC 23595
||| | ||||| || || | ||||||||| | |||| || || | |||||
Sbjct 4410916 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACC 4410857
Query 23596 TTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGC 23655
| || |||| | ||| || | || ||| || || || | | || || ||||| ||
Sbjct 4410856 GGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGC 4410797
Query 23656 GCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC--CTCTTTGGTCGCGACCAAG 23713
|| || ||||| || || || ||||| |||||||| | || || | |||| |
Sbjct 4410796 ACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGT--CAACCAGG 4410739
Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773
|| || || | | || | || ||| |||||||| |||||| || ||| ||||||
Sbjct 4410738 AAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 4410679
Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCG 23833
|| ||||| | ||||| | | ||| || || ||||| ||||||||||| |||
Sbjct 4410678 GTGAAGTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCG 4410619
Query 23834 TGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTA 23893
|| || |||| || || ||||||| || || ||||| | ||| | |||||||
Sbjct 4410618 TGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTA 4410559
Query 23894 ATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCA 23953
|| | || ||||| || | | || |||||||| || |||| ||||| ||||||
Sbjct 4410558 ATCCGAAGAAGGTATGACCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCA 4410499
Query 23954 CGATCGTGCACTATGGCCGAATT 23976
|| |||| ||| || ||||| ||
Sbjct 4410498 CGGTCGTACACAATAGCCGAGTT 4410476
>seq2
Length=5360957
Score = 123 bits (136), Expect = 2e-23
Identities = 285/422 (68%), Gaps = 18/422 (4%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| |||||||| || || ||||| ||||| || ||| || || | || || ||| ||
Sbjct 1779257 GCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTG 1779316
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||||| ||||| || || || || |||||||||||| || || || |||
Sbjct 1779317 AAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTGATGAG 1779376
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160
|||||||| ||||| ||||| || || ||| ||| ||||| | |||| | |
Sbjct 1779377 GGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACAT----GAACCACCGCCCC-- 1779430
Query 58161 GATCGCA------TCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
|| | || | ||| || || |||||| |||| ||||| | ||||| ||
Sbjct 1779431 GACCCCAAGGTGGTTGAGGATATCATTGTCGAGGCTGTCGGAATCGAGCAGGAGTTCCTC 1779490
Query 58215 ACCGAAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACAT 58273
|| || || | | || | |||| |||| || |||||| | |||||| |||||||
Sbjct 1779491 ACTGACGCTCTTCCCTGCGGCC-TGCTTGGCATGAACGCCAAGCTGATGTGCGAGTACAT 1779549
Query 58274 TGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACG 58331
|||||| || || ||| | || || | | || | ||| || | |||||| |
Sbjct 1779550 TGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT-ACTACAACGCT 1779607
Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAA 58391
| || || || || || ||| | ||||| | | |||||||| ||||| ||||||
Sbjct 1779608 ACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACTTCTTCGAA 1779667
Query 58392 AA 58393
||
Sbjct 1779668 AA 1779669
>seq3
Length=5002383
Score = 86.0 bits (94), Expect = 6e-12
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAA-CA 31275
|| ||||| || |||||| | || ||||| | ||| | |||| | ||||| ||
Sbjct 16165 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 16106
Query 31276 GAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335
||| | ||||||||| ||| | || || |||||||||||| | || || || || ||
Sbjct 16105 AAGA-TCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAA 16047
Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395
||| | || ||| | || || ||| |||||||| || || || || ||||| ||
Sbjct 16046 GCAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCCA 15987
Query 31396 TCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||| ||| | || | |||||||
Sbjct 15986 TCTGGTCCTTCGCCTCCGTGGCGGTA 15961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766310846720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |