Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 9e-20
seq2 95.1 2e-14
>seq1
Length=8587311
Score = 113 bits (124), Expect = 9e-20
Identities = 178/255 (70%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || ||||| ||||||||||| || || ||| ||||||||||||||||||
Sbjct 4410828 CCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCC 4410769
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905
|||||||| || | | | | | |||||||| || | || |||||| | ||
Sbjct 4410768 TCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGGGGAGTA 4410709
Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965
| ||| ||||| |||||||| || || || || || | ||||| | | |||
Sbjct 4410708 GCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAGTGGTAT 4410649
Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025
|| |||||| | | ||||| |||||||| |||||||| |||||||| | || |
Sbjct 4410648 GTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATCAGCAAG 4410589
Query 95026 TCCTGAGGGCGCTCA 95040
| |||||| ||||||
Sbjct 4410588 TGCTGAGGACGCTCA 4410574
>seq2
Length=5360957
Score = 95.1 bits (104), Expect = 2e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||| || || || || || |||||||| || ||||||| ||||| ||||||
Sbjct 1779254 GTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCTGG 1779313
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | || | ||||||||||||| | |||||| ||||| || || | ||
Sbjct 1779314 CTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTGAT 1779373
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| ||||| || |||||||| || |||||||
Sbjct 1779374 GAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTT 1779408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583797135280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |