Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 4e-35
seq2 107 3e-18
>seq1
Length=8587311
Score = 163 bits (180), Expect = 4e-35
Identities = 731/1144 (64%), Gaps = 18/1144 (2%)
Strand=Plus/Minus
Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800
||| ||||| || ||||| || ||||||| || || | || |||||||||||
Sbjct 4411426 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAGTGCA 4411367
Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860
|| ||| | || || || | || | || |||||||| ||||| || |||||
Sbjct 4411366 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 4411307
Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920
||| || || ||||| || ||||||| ||| |||| | || | ||| || | |||||
Sbjct 4411306 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGA- 4411248
Query 65921 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATAC 65975
| || ||||||| || | || | | ||| | ||||| | | ||| |
Sbjct 4411247 GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAG 4411190
Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035
| | |||||||| || || | |||| | | ||||| |||| || || |
Sbjct 4411189 AGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 4411132
Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 66094
| || ||| || |||| ||| || || ||||| |||||||| || |||| |||||
Sbjct 4411131 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 4411072
Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154
|| ||| | || | | | | ||||| || || |||||| |||||||||||
Sbjct 4411071 TAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAA 4411013
Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214
| | | | ||| |||||||| |||| ||| ||||| | | || || || |||||
Sbjct 4411012 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTT 4410953
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 4410952 ACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 4410893
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATT 66332
||||| | || ||||| || | || || || | || ||||| | |||
Sbjct 4410892 GTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 4410833
Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392
| ||||| || || || || | || ||||| | || || || | ||||||||
Sbjct 4410832 G--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 4410775
Query 66393 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 66452
|| ||||| || || || | ||| || || || || || | | ||| | |
Sbjct 4410774 ATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGG 4410715
Query 66453 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512
||| | ||||| || | || || || ||||| || || | |||| || | |
Sbjct 4410714 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAG 4410655
Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 66572
| ||| |||||||| || || || ||| |||||||| || || ||||||||
Sbjct 4410654 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATC 4410595
Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 66632
| || ||||||||| | ||| | | ||| ||| || | | ||| || ||
Sbjct 4410594 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCG 4410535
Query 66633 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 66692
| || ||||| || || |||||||| ||||| || ||||| | |||| ||||||||
Sbjct 4410534 AGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTG 4410475
Query 66693 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATCGGAGAATG 66751
|| | || || || |||| | | | | || | | ||| || || |||| |
Sbjct 4410474 AGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGG 4410416
Query 66752 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 66811
|| ||||| || |||||||| | | | | ||| || || ||| | ||
Sbjct 4410415 CTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTT 4410356
Query 66812 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGG 66871
|||||||| ||||| || || || ||||| || | || || | |||||| || || ||
Sbjct 4410355 TTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 4410296
Query 66872 ATGT 66875
|||
Sbjct 4410295 GTGT 4410292
>seq2
Length=5360957
Score = 107 bits (118), Expect = 3e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| || ||| || || || ||| |||||||| || | || || ||||||||
Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| ||
Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 36302
|| ||||| || || || || || || |||||||
Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 1779255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172668365440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |