Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 199 6e-46 seq2 114 2e-20 >seq1 Length=8587311 Score = 199 bits (220), Expect = 6e-46 Identities = 743/1150 (65%), Gaps = 20/1150 (2%) Strand=Plus/Minus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| ||| ||||| || ||||| || ||||||| || || | || || ||| Sbjct 4411431 GCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCA 4411372 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| |||||| | ||| || || | || | || |||||||| ||||| || Sbjct 4411371 GTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAA 4411312 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | | Sbjct 4411311 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 4411252 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATT--GT 79848 |||| | || ||||||| || | |||| | | ||| | ||||| | | Sbjct 4411251 CAGA-GCTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCCTGCTCGTACTTGGC 4411196 Query 79849 GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGA 79908 ||| | | | |||||||| || || | ||||| ||| ||||| || | || Sbjct 4411195 GTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGG 4411138 Query 79909 CACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAA 79968 || | | || ||| || || | ||| || || ||||| |||||||| || |||| Sbjct 4411137 CAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCAC 4411078 Query 79969 AGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 80027 ||||| || ||| || || | | | | |||||| || || |||||| ||||| Sbjct 4411077 AGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATC 4411019 Query 80028 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 ||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || || Sbjct 4411018 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCG 4410959 Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147 ||||| || ||||| || | || | |||||||| ||| | || | || ||| |||| Sbjct 4410958 CTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAAC 4410899 Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTA 80205 |||||| ||||| | || ||||| || | || || || | || ||||| | Sbjct 4410898 AATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTG 4410839 Query 80206 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 80265 |||| ||||| || || || || | || ||||| | || || || | ||| Sbjct 4410838 GACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 4410781 Query 80266 TCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG 80325 ||||| || ||||| ||||| || | ||| || || || || || | | ||| Sbjct 4410780 TCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGG 4410721 Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385 | | ||| | ||||| || | || || || ||||| || || | |||| ||| Sbjct 4410720 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGAC 4410661 Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445 | | | ||| |||||||| || || || ||| |||||||| || || ||| Sbjct 4410660 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACA 4410601 Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGAT 80505 ||||| | || ||||||||| | ||| | | ||| || || | | ||| || Sbjct 4410600 CGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGAC 4410541 Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 80565 || | || ||||| || || |||||||| ||||| || ||||| | |||| || Sbjct 4410540 CGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCC 4410481 Query 80566 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT-ACTTGAAATAATCGG 80624 |||||||| | || || || |||| | | | | ||| | | ||| || || || Sbjct 4410480 GAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGG 4410422 Query 80625 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 80684 || | || ||||| || || ||||| | | | | ||| || || || Sbjct 4410421 AGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAA 4410362 Query 80685 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATA 80744 | | |||||||||| |||||| || || || ||||| || | || || | |||||| || Sbjct 4410361 TTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTA 4410302 Query 80745 ATCTGGATGT 80754 || || ||| Sbjct 4410301 GTCGGGGTGT 4410292 >seq2 Length=5360957 Score = 114 bits (126), Expect = 2e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| || || || ||| |||||||| || | || | |||||||| Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| || Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || |||||||| || || || ||||| |||||||| || Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAACCAG 1779251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268656346240