Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 6e-46
seq2 114 2e-20
>seq1
Length=8587311
Score = 199 bits (220), Expect = 6e-46
Identities = 743/1150 (65%), Gaps = 20/1150 (2%)
Strand=Plus/Minus
Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674
|||| ||| ||||| || ||||| || ||||||| || || | || || |||
Sbjct 4411431 GCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCA 4411372
Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734
||||| |||||| | ||| || || | || | || |||||||| ||||| ||
Sbjct 4411371 GTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAA 4411312
Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794
|||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | |
Sbjct 4411311 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 4411252
Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATT--GT 79848
|||| | || ||||||| || | |||| | | ||| | ||||| | |
Sbjct 4411251 CAGA-GCTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCCTGCTCGTACTTGGC 4411196
Query 79849 GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGA 79908
||| | | | |||||||| || || | ||||| ||| ||||| || | ||
Sbjct 4411195 GTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGG 4411138
Query 79909 CACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAA 79968
|| | | || ||| || || | ||| || || ||||| |||||||| || ||||
Sbjct 4411137 CAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCAC 4411078
Query 79969 AGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 80027
||||| || ||| || || | | | | |||||| || || |||||| |||||
Sbjct 4411077 AGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATC 4411019
Query 80028 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087
||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || ||
Sbjct 4411018 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCG 4410959
Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147
||||| || ||||| || | || | |||||||| ||| | || | || ||| ||||
Sbjct 4410958 CTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAAC 4410899
Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTA 80205
|||||| ||||| | || ||||| || | || || || | || ||||| |
Sbjct 4410898 AATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTG 4410839
Query 80206 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 80265
|||| ||||| || || || || | || ||||| | || || || | |||
Sbjct 4410838 GACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 4410781
Query 80266 TCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG 80325
||||| || ||||| ||||| || | ||| || || || || || | | |||
Sbjct 4410780 TCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGG 4410721
Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385
| | ||| | ||||| || | || || || ||||| || || | |||| |||
Sbjct 4410720 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGAC 4410661
Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445
| | | ||| |||||||| || || || ||| |||||||| || || |||
Sbjct 4410660 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACA 4410601
Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGAT 80505
||||| | || ||||||||| | ||| | | ||| || || | | ||| ||
Sbjct 4410600 CGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGAC 4410541
Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 80565
|| | || ||||| || || |||||||| ||||| || ||||| | |||| ||
Sbjct 4410540 CGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCC 4410481
Query 80566 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT-ACTTGAAATAATCGG 80624
|||||||| | || || || |||| | | | | ||| | | ||| || || ||
Sbjct 4410480 GAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGG 4410422
Query 80625 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 80684
|| | || ||||| || || ||||| | | | | ||| || || ||
Sbjct 4410421 AGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAA 4410362
Query 80685 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATA 80744
| | |||||||||| |||||| || || || ||||| || | || || | |||||| ||
Sbjct 4410361 TTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTA 4410302
Query 80745 ATCTGGATGT 80754
|| || |||
Sbjct 4410301 GTCGGGGTGT 4410292
>seq2
Length=5360957
Score = 114 bits (126), Expect = 2e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || ||| || || || ||| |||||||| || | || | ||||||||
Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| ||
Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
|| |||||||| || || || ||||| |||||||| ||
Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAACCAG 1779251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268656346240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |