Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 6e-39
seq2 111 2e-19
>seq1
Length=8587311
Score = 176 bits (194), Expect = 6e-39
Identities = 740/1153 (64%), Gaps = 24/1153 (2%)
Strand=Plus/Minus
Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753
||| | ||| ||||| || ||||| || ||||||| || || | || | |||||
Sbjct 4411432 GGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGG---GGTACTGTACTCGATAAT 4411376
Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813
|||||||| || ||| | || || || | || | || |||||||| |||||
Sbjct 4411375 CTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 4411316
Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873
|| |||||||| || || || || || ||||||| ||| |||| | || | ||| ||
Sbjct 4411315 GCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGC 4411256
Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTT--TCGTATT- 71929
| ||||| | || ||||||| || | || | | | ||| | ||||| |
Sbjct 4411255 GTACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGC--CACGGCCCTCCTGCTCGTACTT 4411199
Query 71930 -GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTC 71988
| ||| | | | |||||||| || || | ||| ||| ||||| |||||
Sbjct 4411198 GGCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTG 4411141
Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048
|| || | | | ||| || || | | | || || ||||| |||||||| || ||
Sbjct 4411140 GGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTC 4411081
Query 72049 CAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107
|| ||||| || ||| || || | | | | |||||| || || |||||| ||
Sbjct 4411080 CACAGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAG 4411022
Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167
|||||||||| | | | ||| | |||||||| |||| ||| ||||| | | || ||
Sbjct 4411021 ATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGG 4410962
Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227
|| ||||| || ||||| || | || | |||||||| ||| | || | || ||| ||
Sbjct 4410961 GCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGG 4410902
Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--A 72285
|| |||||| ||||| | || ||||| || | || || || | || |||||
Sbjct 4410901 AACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCG 4410842
Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 72345
|| |||| ||||| || || || || | || ||||| | || || || |
Sbjct 4410841 GTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGA 4410784
Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405
|||||||| || ||||| || || || | ||| || || || || || | |
Sbjct 4410783 GTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGC 4410724
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
||| | | ||| | ||||| || | || || || ||||| || || | ||||
Sbjct 4410723 TGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGG 4410664
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525
|||| | | ||| |||||||| || || || ||| || ||||| || ||
Sbjct 4410663 GACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCA 4410604
Query 72526 ACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAG 72585
|||||||| | || |||||||| | ||| | | ||| || || | | |||
Sbjct 4410603 ACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTAT 4410544
Query 72586 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 72645
|| || | || ||||| || || |||||||| ||||| || ||||| | ||||
Sbjct 4410543 GACCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATA 4410484
Query 72646 ACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGAT-ACTTGAAATAAT 72704
|||| ||||| | || || || |||| || | | | ||| | | ||| || ||
Sbjct 4410483 GCCGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCAT 4410425
Query 72705 CGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT 72764
|||| | || ||||| || || ||||| | | | | ||| || ||
Sbjct 4410424 AGGAGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGA 4410365
Query 72765 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGC 72824
||| | |||||||||| |||||| || || || ||||| || | || || ||||||||
Sbjct 4410364 GAATTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGC 4410305
Query 72825 ATAATCTGGATGT 72837
|| || || |||
Sbjct 4410304 GTAGTCGGGGTGT 4410292
>seq2
Length=5360957
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || ||| || || || ||| ||||||||||| | || || ||||||||
Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| ||||| || ||||||||||||||||| || ||||| || || || || ||||| ||
Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209
|| |||||||| || || || || || |||||||
Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 1779255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139065772160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |