Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 3e-18
>seq1
Length=8587311
Score = 107 bits (118), Expect = 3e-18
Identities = 320/487 (66%), Gaps = 10/487 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || || | ||| ||||| |||| || |||||||| ||
Sbjct 4410944 CAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 4411003
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || |||| ||||||| || || || |||| || || | |||
Sbjct 4411004 GTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCTCGTGAC 4411063
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052
| || || || || ||| || ||| | ||||||||||||||| | | ||||||
Sbjct 4411064 CTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTG-- 4411121
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || | |||||| | | | || || || | ||| || || || |||
Sbjct 4411122 -ACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAG 4411180
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171
|| ||||| ||| | |||||||| |||||||| || |||| | || | ||
Sbjct 4411181 TTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 4411239
Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230
| |||| || ||| | ||||| | ||| ||| |||||||| | || | ||| |
Sbjct 4411240 TC-AGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGC 4411298
Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||||| | || || || ||||| || |||| || || |||
Sbjct 4411299 TCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCT 4411358
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350
| || |||||||| || ||| | |||||| | || || ||| ||| |||||| |
Sbjct 4411359 CTAACCTGTGCACTGAGATTATCGAGTACAGTACCCCTGATGAGGTGGCTGTTTGCAACC 4411418
Query 97351 TGGCATC 97357
|||| ||
Sbjct 4411419 TGGCTTC 4411425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059051788160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |