Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 123 6e-23 >seq3 Length=5002383 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| || || |||||||| || ||||||||||| || || | |||||| || || || Sbjct 15701 TGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCCAGCTGC 15760 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || ||||| || | | ||| || ||||| || || || || || ||||| |||||| Sbjct 15761 TTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTT 15820 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || || || || | ||||||||||| || ||||| || ||||| ||||| || || Sbjct 15821 GACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTCCGGTC 15880 Query 104537 AGTGTTTTTAC 104547 || || || || Sbjct 15881 AGGGTCTTGAC 15891 Score = 104 bits (114), Expect = 5e-17 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || ||||| | || || || || || || ||||| || Sbjct 15257 TCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 15316 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487 || || | ||| || |||||||| || || || || ||||||||| ||||| || || || Sbjct 15317 ATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTT 15375 Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 || | ||| || || | || ||||||||||| |||||||| || || | || || | Sbjct 15376 GTCGATGGTGTC-TGAGCTCTCCACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGA 15434 Query 104547 CAAATATCTGCAT 104559 |||| || ||||| Sbjct 15435 CAAAGATTTGCAT 15447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398163963328