Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 2e-39
>seq3
Length=5002383
Score = 174 bits (192), Expect = 2e-39
Identities = 201/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| || |
Sbjct 1435732 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCCA 1435790
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || ||||| || ||||||||| |||| | || |||| || ||||
Sbjct 1435791 TCCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 1435850
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| |||| | || |||| |||| ||||||| || ||| ||||
Sbjct 1435851 CCCGCGGCGTGCTCAAGTCCTTCTTGGAGTCCGTCATCCGTGATGCTGTCACCTACACCG 1435910
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| ||||||||||| || || | || | |||||||| | || || ||||
Sbjct 1435911 AGCACGCTAAGCGTAAGACTGTTACTTCGCTTGACGTTGTCTATGCTCTTAAGCGCCAAG 1435970
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| |||| || || || ||||
Sbjct 1435971 GCCGTACTCTTTACGGATTCGGTGGTTA 1435998
Score = 174 bits (192), Expect = 2e-39
Identities = 190/250 (76%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||| || |||||||||||||| |||||
Sbjct 4557454 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATCACCAAGCCCGCTAT 4557512
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || ||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 4557513 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 4557572
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | |||| ||||||| || || |||| ||| ||| || ||| || ||
Sbjct 4557573 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 4557632
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | || | ||||| || | || || || ||
Sbjct 4557633 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 4557692
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 4557693 CCGTAAGTTT 4557702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075185371088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |