Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 132 5e-26 seq1 116 3e-21 seq3 107 2e-18 >seq2 Length=5360957 Score = 132 bits (146), Expect = 5e-26 Identities = 308/458 (67%), Gaps = 15/458 (3%) Strand=Plus/Plus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || ||||| |||| |||| ||||| || ||||||||| |||| || || ||| Sbjct 1779236 ACCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCA 1779295 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || ||| ||||||| | | || | ||| | ||||| || || || || |||| Sbjct 1779296 TTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAAC 1779355 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||| |||| || || || ||||| || || || |||||||| ||||| || | | | Sbjct 1779356 GAGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGCTTGTCTG--CTGTT-CTCC 1779412 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACC---GTGCT-GAGCATGTTCAAG--GAGGCG 46377 | | || || || || |||||| || ||| | ||| || | | ||||| Sbjct 1779413 CACATGAACCACC-----GC-CCCGACCCCAAGGTGGTTGAGGATATCATTGTCGAGGCT 1779466 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 || | || ||| ||||||| | || | ||| || ||| | |||||| ||||||||| Sbjct 1779467 GTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAAC 1779526 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 || || |||||||| ||||| ||||| || || ||||| ||||| ||| || | Sbjct 1779527 GCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGC 1779586 Query 46498 CAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| | | |||| ||| || || || || ||| | ||||||| ||| Sbjct 1779587 AACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCC 1779646 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || ||||||||||| ||||| || || Sbjct 1779647 GGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTA 1779684 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | |||||||||||| || ||||||||||| Sbjct 1552201 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAA 1552142 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| ||||| || ||||| || || Sbjct 1552141 AGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGA 1552082 Query 131128 ATTCCTTCTTTGTC-GGTG 131145 || || || ||||| |||| Sbjct 1552081 ATACCCTCCTTGTCTGGTG 1552063 >seq1 Length=8587311 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| ||||||||||| ||| ||| Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||| ||||| || || || || || ||||| ||| || ||||| | | Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 959451 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| |||| ||||| ||| ||||| || || || || |||| Sbjct 959450 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 959391 Query 131225 AA 131226 || Sbjct 959390 AA 959389 >seq3 Length=5002383 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || |||| || ||||| || || ||||| || || | Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| || |||| |||||||||||||| || || Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | |||||| | ||||| | Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACC 15856 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||||| ||| || ||||| || || || |||| Sbjct 15857 TCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 15893 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | || |||||||| || ||||| || ||| || ||||| | Sbjct 15975 CGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCG 16034 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || || |||| ||||||||||||||||| || || || || ||| Sbjct 16035 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 16094 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | |||||| ||||||| | || | ||| | | Sbjct 16095 TCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATG 16154 Query 131200 GTTTTACCGGT 131210 || || || || Sbjct 16155 GTCTTGCCAGT 16165 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || ||||| || |||||||||||| Sbjct 15449 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 15508 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| | ||| |||||||| || || Sbjct 15509 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 15568 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||| | | || | |||||||| ||||||| Sbjct 15569 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 15628 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || |||||||||||||| Sbjct 15629 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012705597440