Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 187 3e-42
seq2 107 2e-18
>seq1
Length=8587311
Score = 187 bits (206), Expect = 3e-42
Identities = 736/1144 (64%), Gaps = 18/1144 (2%)
Strand=Plus/Minus
Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811
||| ||||| || ||||| || ||||||| || || | || |||||||||||
Sbjct 4411426 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAGTGCA 4411367
Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871
|| ||| | || || || | || | || |||||||| ||||| || |||||
Sbjct 4411366 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 4411307
Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931
||| || || ||||| || ||||||| ||| |||| | || | ||| || | |||||
Sbjct 4411306 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGA- 4411248
Query 62932 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATAC 62986
| || ||||||| || | || | | ||| | ||||| | | ||| |
Sbjct 4411247 GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAG 4411190
Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046
| | |||||||| || || | |||| | || ||||| |||| || || |
Sbjct 4411189 AGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 4411132
Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63105
| || ||| || |||| ||| || || ||||| |||||||| || |||| |||||
Sbjct 4411131 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 4411072
Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165
|| ||| || || | | | | ||||| || || |||||| |||||||||||
Sbjct 4411071 TAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAA 4411013
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
| | | | ||| | |||||||| |||| ||| ||||| | | || || || |||||
Sbjct 4411012 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTT 4410953
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 4410952 ACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 4410893
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63343
||||| | || ||||| || | || || || | || ||||| | |||
Sbjct 4410892 GTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 4410833
Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 63403
| ||||| || || || || | || ||||| | || || || | ||||||||
Sbjct 4410832 G--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 4410775
Query 63404 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63463
|| ||||| || || || | ||| || || || || || | | ||| | |
Sbjct 4410774 ATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGG 4410715
Query 63464 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523
||| | ||||| || | || || || |||||||| || | |||| || | |
Sbjct 4410714 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAG 4410655
Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63583
| ||| |||||||| || || || ||| |||||||| || || ||||||||
Sbjct 4410654 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATC 4410595
Query 63584 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63643
| || ||||||||| | ||| | | ||| ||| || | | ||| || ||
Sbjct 4410594 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCG 4410535
Query 63644 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703
| || ||||| || || |||||||| ||||| || ||||| | |||| ||||||||
Sbjct 4410534 AGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTG 4410475
Query 63704 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATAGGAAAATG 63762
|| | || || || |||| | | | | || | | ||| || |||||| |
Sbjct 4410474 AGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGG 4410416
Query 63763 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822
|| ||||| || |||||||| | | | | ||| || || ||| | ||
Sbjct 4410415 CTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTT 4410356
Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882
|||||||| ||||| || || || ||||| || | || || |||||||| || || ||
Sbjct 4410355 TTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 4410296
Query 63883 ATGT 63886
|||
Sbjct 4410295 GTGT 4410292
>seq2
Length=5360957
Score = 107 bits (118), Expect = 2e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| || ||| || || || ||| |||||||| || | || || ||||||||
Sbjct 1779408 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 1779349
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| ||
Sbjct 1779348 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 1779289
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805
|| ||||| || || || || || || |||||||
Sbjct 1779288 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 1779255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631873273600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |