Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 5e-23
seq5 107 4e-18
>seq2
Length=5360957
Score = 123 bits (136), Expect = 5e-23
Identities = 276/412 (67%), Gaps = 8/412 (2%)
Strand=Plus/Minus
Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613
||||| ||||||||| || | |||||| ||| ||||| ||||||||||||||||
Sbjct 1779675 ACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAG 1779616
Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673
||||| || || ||||| | ||| | ||| || || || | | |||||| || ||
Sbjct 1779615 GGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACG 1779556
Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCC 251733
||||| | |||| | |||||| | | ||||||||||| || | || |||| ||
Sbjct 1779555 AACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGGCCGCAGGGAAGAGCG 1779496
Query 251734 TCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC----TG 251789
||| || ||| |||| ||| | | || ||||| | | || ||| ||| ||
Sbjct 1779495 TCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAACCACCTTG 1779436
Query 251790 TGCCAGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAG 251849
| | | | | | ||| || | ||| |||| || |||| | ||| ||
Sbjct 1779435 GGGTCGGGGC-GGTGGTT---CATGTGGGAGAACAGCAGACAAGCAAAGTCAGTGTGGAG 1779380
Query 251850 ACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTT 251909
|||||| || || ||| ||||||||||| | | || |||||||| | ||||| ||
Sbjct 1779379 ACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTT 1779320
Query 251910 CCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
| | ||||||||||| | | || || || ||||| | | |||||| |||
Sbjct 1779319 CTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACA 1779268
>seq5
Length=1643254
Score = 107 bits (118), Expect = 4e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403
||||| ||||| || |||| |||||| || || || |||| ||||||||||| ||
Sbjct 441121 AGGTGTCGATCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTTAA 441062
Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
| || | ||| | | ||||||||| | || || |||||| |||| ||||| || |
Sbjct 441061 CCAGACTCACCTGCGCCTGAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 441002
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|| |||| ||| || ||||| ||||| |||| ||||| || || || || ||
Sbjct 441001 CGGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 440942
Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || |||||||| |||||||
Sbjct 440941 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 440900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836589293456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |