Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 4e-36
seq2 159 6e-34
seq1 138 2e-27
>seq3
Length=5002383
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||| || || |||||||| ||||||||
Sbjct 15449 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 15508
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | ||||| || | |||||| ||||| || ||||| | ||| ||||| || |||
Sbjct 15509 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 15568
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||||||||| | ||| || ||||| || || | ||| || |||
Sbjct 15569 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 15628
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || ||||| ||||||||||| ||||||||
Sbjct 15629 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
Score = 156 bits (172), Expect = 8e-33
Identities = 167/218 (77%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||||||||| ||||||||||| ||||||||||| || ||
Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || || | | || ||||| || |||
Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||||| ||| ||| |||||||| || ||| || || ||
Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATC-GCTAGACTCAAC 15855
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||| ||||| ||||| || |||||||||||||
Sbjct 15856 CTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 15893
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || ||||| |||| ||| || ||| ||| || |||||||| || || ||
Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || |||
Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| ||||||| ||||||||||||| || ||
Sbjct 15341 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 15400
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || ||||| || | |||||||| || || |||||
Sbjct 15401 TCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 134 bits (148), Expect = 3e-26
Identities = 155/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| || || |||||||| || ||||||||||| |||||
Sbjct 15963 CCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 16022
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | || || || | |||||| ||||| || || | | || ||||| || |||
Sbjct 16023 AGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGA 16082
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||||| |||||| |||||||| || ||| || || ||
Sbjct 16083 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATC-GCTGGACTCAAC 16141
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 16142 CTCAAGGGTGATGGTCTTGCCAGTGA 16167
>seq2
Length=5360957
Score = 159 bits (176), Expect = 6e-34
Identities = 304/444 (68%), Gaps = 18/444 (4%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || ||||||||||||| |||||| |
Sbjct 1779703 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGC 1779644
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
| ||| ||| |||||||||||| |||||||| ||| | | ||| || ||
Sbjct 1779643 CAAGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 1779584
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||||||| |||||||| ||||||| || |||||| | | |||
Sbjct 1779583 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTT 1779524
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || || |||||| | ||||| | ||| |||| ||| | |||| |
Sbjct 1779523 CATGCCAAGCAGGCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAG- 1779465
Query 10175 TTCCTCGACGATGCT---CTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTT 10225
||||||| ||| | || ||||| ||| ||| | | | |||| | |
Sbjct 1779464 --CCTCGACAATGATATCCTCAACCACCTTGGGGTC--GGGGC-GGTGGTTC---ATGTG 1779413
Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285
|| |||| || |||| | |||||| ||||| || ||| ||| ||||||||
Sbjct 1779412 GGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTT 1779353
Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345
||| ||| ||||| ||||| || || || || ||||||||| |||| | ||| ||
Sbjct 1779352 GGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGA 1779293
Query 10346 CCCGGAGAACAGAAGACCCTCCAC 10369
|||||||| | | |||||||||
Sbjct 1779292 GCCGGAGAAGAAGATACCCTCCAC 1779269
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/167 (72%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682
|||||||| | || || || ||| | | || |||||| |||||| ||| || ||||
Sbjct 1778956 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAG 1778897
Query 10683 TGGCGCTCATCATCGTTCA---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGG 10739
| |||||||| ||||||| | || | ||||||| | ||||| | || | |
Sbjct 1778896 TAACGCTCATCGTCGTTCAAGCGGTTGT---GCCAGTCGTGAAGATCCTTGGAAAGATCG 1778840
Query 10740 ACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
| |||||| |||||||||||| || |||||||||||||||| ||
Sbjct 1778839 ATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTG 1778793
>seq1
Length=8587311
Score = 138 bits (152), Expect = 2e-27
Identities = 140/180 (78%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | |||||||| || |||||||| |||||||| || ||||| | ||||||| |||
Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 959448 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 959390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622215675520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |