Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 167 4e-36 seq2 159 6e-34 seq1 138 2e-27 >seq3 Length=5002383 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || |||||||| |||||||| Sbjct 15449 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 15508 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||| ||||| || ||||| | ||| ||||| || ||| Sbjct 15509 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 15568 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||||||||| | ||| || ||||| || || | ||| || ||| Sbjct 15569 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 15628 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||| ||||||||||| |||||||| Sbjct 15629 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675 Score = 156 bits (172), Expect = 8e-33 Identities = 167/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||||| ||||||||||| ||||||||||| || || Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || | | || ||||| || ||| Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||||| ||| ||| |||||||| || ||| || || || Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATC-GCTAGACTCAAC 15855 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||| ||||| ||||| || ||||||||||||| Sbjct 15856 CTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 15893 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||| ||| || ||| ||| || |||||||| || || || Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||||||| ||||||||||||| || || Sbjct 15341 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 15400 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || | |||||||| || || ||||| Sbjct 15401 TCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Score = 134 bits (148), Expect = 3e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| || || |||||||| || ||||||||||| ||||| Sbjct 15963 CCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 16022 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || | |||||| ||||| || || | | || ||||| || ||| Sbjct 16023 AGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGA 16082 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||||| |||||| |||||||| || ||| || || || Sbjct 16083 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATC-GCTGGACTCAAC 16141 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 16142 CTCAAGGGTGATGGTCTTGCCAGTGA 16167 >seq2 Length=5360957 Score = 159 bits (176), Expect = 6e-34 Identities = 304/444 (68%), Gaps = 18/444 (4%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || ||||||||||||| |||||| | Sbjct 1779703 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGC 1779644 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 | ||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 1779643 CAAGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 1779584 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||| ||||||| || |||||| | | ||| Sbjct 1779583 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTT 1779524 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || || |||||| | ||||| | ||| |||| ||| | |||| | Sbjct 1779523 CATGCCAAGCAGGCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAG- 1779465 Query 10175 TTCCTCGACGATGCT---CTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTT 10225 ||||||| ||| | || ||||| ||| ||| | | | |||| | | Sbjct 1779464 --CCTCGACAATGATATCCTCAACCACCTTGGGGTC--GGGGC-GGTGGTTC---ATGTG 1779413 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 || |||| || |||| | |||||| ||||| || ||| ||| |||||||| Sbjct 1779412 GGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTT 1779353 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 ||| ||| ||||| ||||| || || || || ||||||||| |||| | ||| || Sbjct 1779352 GGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGA 1779293 Query 10346 CCCGGAGAACAGAAGACCCTCCAC 10369 |||||||| | | ||||||||| Sbjct 1779292 GCCGGAGAAGAAGATACCCTCCAC 1779269 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| |||||| ||| || |||| Sbjct 1778956 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAG 1778897 Query 10683 TGGCGCTCATCATCGTTCA---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGG 10739 | |||||||| ||||||| | || | ||||||| | ||||| | || | | Sbjct 1778896 TAACGCTCATCGTCGTTCAAGCGGTTGT---GCCAGTCGTGAAGATCCTTGGAAAGATCG 1778840 Query 10740 ACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | |||||| |||||||||||| || |||||||||||||||| || Sbjct 1778839 ATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTG 1778793 >seq1 Length=8587311 Score = 138 bits (152), Expect = 2e-27 Identities = 140/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 959448 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 959390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622215675520