Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 2e-16
seq1 91.5 1e-13
>seq3
Length=5002383
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| |||||||| | | || | || | || ||||| || || ||||||||||||
Sbjct 15446 ATACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCG 15505
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| ||||| || || || || |||||||||| || ||||| ||
Sbjct 15506 GAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGG 15565
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || || || |||||| || | | || | || |||| || |||
Sbjct 15566 GGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCG 15625
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || |||||||| || || || || |||||||||||
Sbjct 15626 ACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
>seq1
Length=8587311
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| || |||||||| ||||||| || || ||| || || || || || ||| ||||
Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|||||||||||||| || |||||||| || ||||| ||||| || | | ||
Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||||||| | || ||||| || | ||| | || || || ||||| || || || |||
Sbjct 959448 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 959389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134318073792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |