Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
>seq3
Length=5002383
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || ||||||||||| | | ||||| | || ||||||||||| |||
Sbjct 15479 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCG 15538
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||| || |||||||| || ||||| || || || ||||| || || |||
Sbjct 15539 GCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTC 15598
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | ||||| | || ||||| | || | ||||||||||| | ||
Sbjct 15599 ACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTC 15658
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 15659 TTGACGAAAATCTGCAT 15675
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | ||| || ||||| | || || || || || ||||| || || |
Sbjct 15962 ACCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGA 16021
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || |||||||| |||||| | || | ||||||||||| || ||
Sbjct 16022 CAGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGG 16081
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || ||| ||| ||| || | ||||| | || || ||
Sbjct 16082 AATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAAC 16141
Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419
|| | || | ||||||||| ||
Sbjct 16142 CTCAAGGGTGATGGTCTTGCCAGT 16165
Score = 86.0 bits (94), Expect = 6e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || ||||| || || | | ||| || |||| || ||||||||||||
Sbjct 15707 GTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCCAGCTGCTTGCCG 15766
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | ||||||||||| || ||||| || || || || || || ||| |||
Sbjct 15767 GCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTC 15826
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||||| | | || || || | || | |||||| ||||||| ||
Sbjct 15827 ACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTC 15886
Query 64427 TTTACGA 64433
|| ||||
Sbjct 15887 TTGACGA 15893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644700071040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |