Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=5002383 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || ||||||||||| | | ||||| | || ||||||||||| ||| Sbjct 15479 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCG 15538 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| || |||||||| || ||||| || || || ||||| || || ||| Sbjct 15539 GCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTC 15598 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || ||||| | || | ||||||||||| | || Sbjct 15599 ACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTC 15658 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 15659 TTGACGAAAATCTGCAT 15675 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||| || ||||| | || || || || || ||||| || || | Sbjct 15962 ACCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGA 16021 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || |||||||| |||||| | || | ||||||||||| || || Sbjct 16022 CAGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGG 16081 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || ||| ||| ||| || | ||||| | || || || Sbjct 16082 AATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAAC 16141 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | || | ||||||||| || Sbjct 16142 CTCAAGGGTGATGGTCTTGCCAGT 16165 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||| || || | | ||| || |||| || |||||||||||| Sbjct 15707 GTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCCAGCTGCTTGCCG 15766 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | ||||||||||| || ||||| || || || || || || ||| ||| Sbjct 15767 GCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTC 15826 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | | || || || | || | |||||| ||||||| || Sbjct 15827 ACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTC 15886 Query 64427 TTTACGA 64433 || |||| Sbjct 15887 TTGACGA 15893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644700071040