Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 149 6e-31 seq1 102 8e-17 seq3 89.7 5e-13 >seq2 Length=5360957 Score = 149 bits (164), Expect = 6e-31 Identities = 302/446 (68%), Gaps = 23/446 (5%) Strand=Plus/Plus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| || ||||| | || || |||||| || ||| ||||||| | Sbjct 1779252 TGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 1779311 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 | || | | ||| ||||||| || || || ||| |||||||||||| || || | Sbjct 1779312 GGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTG 1779371 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 | || || || ||||| |||||||| || || || | ||| || | | ||| Sbjct 1779372 ATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 1779431 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||| | || ||| ||||| || | ||||| Sbjct 1779432 ACCCCAAGGTGGTTGAGGATATCAT--------TGTC----GAGGCTGTCGGAATCGAGC 1779479 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| | || | ||| || || || ||||| ||||||||||| || |||| Sbjct 1779480 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 1779539 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||||||||| ||||| || || || || ||| ||||| ||| |||| | | |||||| Sbjct 1779540 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTC-GGCAACAAGAAGTAC 1779598 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||||| ||| || || || || ||| | ||| || | | |||||||||||| Sbjct 1779599 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAAC 1779658 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||| ||||| ||||| || || Sbjct 1779659 TTCTTCGAAAAGCGTGTCGGTGACTA 1779684 >seq1 Length=8587311 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||||||||| || || || || || ||||| || | || || || | ||| Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 959452 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 959451 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 959393 Query 138603 AAAA 138606 ||| Sbjct 959392 GAAA 959389 >seq3 Length=5002383 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| |||||| || | || | | |||||| || ||||||||||| Sbjct 15220 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 15279 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||| || || ||||| | |||| |||||||| ||||| ||||| Sbjct 15280 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 15339 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | |||||| | |||| Sbjct 15340 AATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCTGAGCTCTCC 15397 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || || |||| ||| || ||||| || ||||| Sbjct 15398 ACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262300747520