Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 6e-31
seq1 102 8e-17
seq3 89.7 5e-13
>seq2
Length=5360957
Score = 149 bits (164), Expect = 6e-31
Identities = 302/446 (68%), Gaps = 23/446 (5%)
Strand=Plus/Plus
Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461
|||| ||||||||| || ||||| | || || |||||| || ||| ||||||| |
Sbjct 1779252 TGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 1779311
Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521
| || | | ||| ||||||| || || || ||| |||||||||||| || || |
Sbjct 1779312 GGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTG 1779371
Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575
| || || || ||||| |||||||| || || || | ||| || | | |||
Sbjct 1779372 ATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 1779431
Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632
| || ||| | ||| | || ||| ||||| || | |||||
Sbjct 1779432 ACCCCAAGGTGGTTGAGGATATCAT--------TGTC----GAGGCTGTCGGAATCGAGC 1779479
Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692
||||||| | || | ||| || || || ||||| ||||||||||| || ||||
Sbjct 1779480 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 1779539
Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751
|||||||||| ||||| || || || || ||| ||||| ||| |||| | | ||||||
Sbjct 1779540 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTC-GGCAACAAGAAGTAC 1779598
Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811
| ||||||| ||| || || || || ||| | ||| || | | ||||||||||||
Sbjct 1779599 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAAC 1779658
Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| ||||| ||||| ||||| || ||
Sbjct 1779659 TTCTTCGAAAAGCGTGTCGGTGACTA 1779684
>seq1
Length=8587311
Score = 102 bits (112), Expect = 8e-17
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| |||||||||||||| || || || || || ||||| || | || || || | |||
Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 959452
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 959451 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 959393
Query 138603 AAAA 138606
|||
Sbjct 959392 GAAA 959389
>seq3
Length=5002383
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| |||||| || | || | | |||||| || |||||||||||
Sbjct 15220 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 15279
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| |||||| ||||| || || ||||| | |||| |||||||| ||||| |||||
Sbjct 15280 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 15339
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| | || | || | ||| || | |||||| | ||||
Sbjct 15340 AATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCTGAGCTCTCC 15397
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | || || || |||| ||| || ||||| || |||||
Sbjct 15398 ACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262300747520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |