Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 102 8e-17 seq1 98.7 9e-16 >seq3 Length=5002383 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||| || | || ||| || || || ||||| || Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||||| |||| |||| |||||| | ||||| || Sbjct 15341 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCTGAGCTCTCCAC 15399 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| ||| || ||||| || ||||| Sbjct 15400 CTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| |||| || |||||||| || || || || || | Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| || || || ||||||| |||||||| || || || Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||| | |||| |||| ||| || || ||| || Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTG-TCGATGGTATCGCTAGACTCAAC 15855 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| | || || |||||||| || || || Sbjct 15856 CTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGAC 15891 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || ||||| || || || || || ||| || |||||| || || Sbjct 15981 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 16040 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| ||||| || ||||||| |||||||| || || || ||||||||||||||| | Sbjct 16041 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 16100 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | |||| ||| || | ||| || || | ||| | || ||| Sbjct 16101 ATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 16160 Query 127085 CCGGT 127089 || || Sbjct 16161 CCAGT 16165 >seq1 Length=8587311 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||| || || || || ||||||||||||||| ||| || ||||| |||| || Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 959450 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 959449 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 959390 Query 127105 A 127105 | Sbjct 959389 A 959389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500704899840